G523817


Basic Information

Item Value
gene id G523817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55728731 ~ 55728948 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593719
gctctgatgctgttgatggtcattagtagcctaccaaacttgctaactgcctggtactcagcactctattgtccctctaatcactctgacatcactgCAAATGTAATCTAAACTCTAATCAAACACCTTATGAGAGCCCATGAGCGCATGtggcgcaacatttctataggattTGCAATTGCTCAAGCAAAcacagtgatggcctctattaaaaagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593719 True 218 lncRNA 0.43 1 55728731 55728948

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 160564 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 280595 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 363989 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 593109 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 660488 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 175116 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 236274 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 242492 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 253322 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 291677 56020625 ~ 56120747 (+)
G523816 NA non-coding upstream 1962 55726538 ~ 55726769 (+)
G523809 NA non-coding upstream 12658 55715820 ~ 55716073 (+)
G523803 NA non-coding upstream 24063 55704404 ~ 55704668 (+)
G523802 LOC106587075 non-coding upstream 25012 55702806 ~ 55703719 (+)
G523801 NA non-coding upstream 26664 55701858 ~ 55702067 (+)
G523822 NA non-coding downstream 8234 55737182 ~ 55737434 (+)
G523825 NA non-coding downstream 15745 55744693 ~ 55744899 (+)
G523826 NA non-coding downstream 17842 55746790 ~ 55747117 (+)
G523827 NA non-coding downstream 19920 55748868 ~ 55749089 (+)
G523828 NA non-coding downstream 20202 55749150 ~ 55749552 (+)
G523529 NA other upstream 244124 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 787858 54793125 ~ 54954478 (+)
G521914 NA other upstream 1458472 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1773601 53925942 ~ 53955130 (+)
G525645 NA other downstream 1847136 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1875160 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1892900 57621795 ~ 57635241 (+)

Expression


Co-expression Network