G523825


Basic Information

Item Value
gene id G523825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55744693 ~ 55744899 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593727
ccCTAAGCATGTATAATGTGATTATAGTGTGCCTGAAGACATCCGGGCATGATATAATTTCATACTCATTGTTTTTGccacaaaagcaggattaaatTCTTCTTATTCAGTCTCAGATGAAAATGAATATTCAACAGGACTGTATTGCAATAGACCAGAATAATATTCAACAAGACTGTATTGGAATAGACCAGAATAATATTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593727 True 207 lncRNA 0.33 1 55744693 55744899

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 176526 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 296557 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 379951 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 609071 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 676450 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 159165 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 220323 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 226541 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 237371 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 275726 56020625 ~ 56120747 (+)
G523822 NA non-coding upstream 7259 55737182 ~ 55737434 (+)
G523817 NA non-coding upstream 15745 55728731 ~ 55728948 (+)
G523816 NA non-coding upstream 17924 55726538 ~ 55726769 (+)
G523809 NA non-coding upstream 28620 55715820 ~ 55716073 (+)
G523803 NA non-coding upstream 40025 55704404 ~ 55704668 (+)
G523826 NA non-coding downstream 1891 55746790 ~ 55747117 (+)
G523827 NA non-coding downstream 3969 55748868 ~ 55749089 (+)
G523828 NA non-coding downstream 4251 55749150 ~ 55749552 (+)
G523829 NA non-coding downstream 4909 55749808 ~ 55750023 (+)
G523845 NA non-coding downstream 40331 55785230 ~ 55785515 (+)
G523529 NA other upstream 260086 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 803820 54793125 ~ 54954478 (+)
G521914 NA other upstream 1474434 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1789563 53925942 ~ 53955130 (+)
G525645 NA other downstream 1831185 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1859209 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1876949 57621795 ~ 57635241 (+)

Expression


Co-expression Network