G523845



Basic Information


Item Value
gene id G523845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55785230 ~ 55785515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU593747
AAACAGAACACATCCACAGCCAAACTCATTCCATATACTAGTCTAAATAACAGGTTGCGCTGACAAAAAAACGAAACATAAGCTTGCGACCTAACAGCTAGACCTGTTTACAATGTACCTCTGTTAAGCACATGGGAGAAATGTAAAATTGTTTAGAAAAGAGATGCGTGTCAGCTAAGCTAACAGCTGCTAAATTCTTTATGATGGCAgccatgtttgtttatgtttgacaTCTCAGAATGCCATTCACTATAAGATGCAAATAAACCAAGTCAAAGATGGCTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU593747 True 286 lncRNA 0.38 1 55785230 55785515
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 217063 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 337094 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 420488 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 649608 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 716987 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 118549 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 179707 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 185925 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 196755 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 235110 56020625 ~ 56120747 (+)
G523829 NA non-coding upstream 35207 55749808 ~ 55750023 (+)
G523828 NA non-coding upstream 35678 55749150 ~ 55749552 (+)
G523827 NA non-coding upstream 36141 55748868 ~ 55749089 (+)
G523826 NA non-coding upstream 38113 55746790 ~ 55747117 (+)
G523825 NA non-coding upstream 40331 55744693 ~ 55744899 (+)
G523849 NA non-coding downstream 4464 55789979 ~ 55790212 (+)
G523856 NA non-coding downstream 15351 55800866 ~ 55869285 (+)
G523896 NA non-coding downstream 83847 55869362 ~ 55869565 (+)
G523904 NA non-coding downstream 97456 55882971 ~ 55883201 (+)
G523908 NA non-coding downstream 104182 55889697 ~ 55889936 (+)
G523529 NA other upstream 300623 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 844357 54793125 ~ 54954478 (+)
G521914 NA other upstream 1514971 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1830100 53925942 ~ 53955130 (+)
G525645 NA other downstream 1790569 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1818593 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1836333 57621795 ~ 57635241 (+)

Expression


G523845 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
End of interactive chart.

G523845 Expression in each Bioproject

Bar chart with 6 bars.
G523845 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 14.
End of interactive chart.

Co-expression Network