G523915


Basic Information

Item Value
gene id G523915
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55895064 ~ 55895327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593823
TCGTTTACACTTTACAGTATGATCAAAATTACATTTTATTACATTGACACCTGGATTTGTTTATAATGGGGGTGTTTGGCTTCCCATGCTCCTTCATCAAAATGTCTCACTCTAAAGTGCTACCAATATGAAACCATTATACTGTGTCTTGGTTTGCACTATCGGTGAACTAAAGTCAACACCTCAACAGCATATGCTCTTTTTTCCCCTCGGCATAACGCTGATCCTATAAATCAAACCGTTTCCACAGAAACCCTGTGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593823 True 264 lncRNA 0.39 1 55895064 55895327

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 326897 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 446928 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 530322 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 759442 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 826821 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 8737 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 69895 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 76113 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 86943 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 125298 56020625 ~ 56120747 (+)
G523914 NA non-coding upstream 1119 55893676 ~ 55893945 (+)
G523908 NA non-coding upstream 5128 55889697 ~ 55889936 (+)
G523904 NA non-coding upstream 11863 55882971 ~ 55883201 (+)
G523896 NA non-coding upstream 25499 55869362 ~ 55869565 (+)
G523856 NA non-coding upstream 25779 55800866 ~ 55869285 (+)
G523936 zdh13 non-coding downstream 31040 55926367 ~ 55927215 (+)
G523939 zdh13 non-coding downstream 35401 55930728 ~ 55940668 (+)
G523959 NA non-coding downstream 74111 55969438 ~ 55970160 (+)
G523529 NA other upstream 410457 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 954191 54793125 ~ 54954478 (+)
G521914 NA other upstream 1624805 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1939934 53925942 ~ 53955130 (+)
G525645 NA other downstream 1680757 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1708781 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1726521 57621795 ~ 57635241 (+)

Expression


Co-expression Network