Gene
RNA
| Item | Value |
|---|---|
| gene id | G524073 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 56139929 ~ 56140478 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: DNA damage-binding protein 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU593999 | True | 502 | lncRNA | 0.46 | 2 | 56139929 | 56140478 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526175 | LOC106587084 | coding | upstream | 19182 | 56020625 ~ 56120747 (+) |
| LOC110526173 | LOC106587080 | coding | upstream | 150475 | 55982270 ~ 55990919 (+) |
| LOC110526171 | LOC106587080 | coding | upstream | 159025 | 55971440 ~ 55980904 (+) |
| LOC110526172 | LOC106561172 | coding | upstream | 171838 | 55965222 ~ 55968091 (+) |
| LOC110526169 | LOC106587076 | coding | upstream | 223848 | 55904064 ~ 55916081 (+) |
| LOC110526177 | LOC106587086 | coding | downstream | 44654 | 56185132 ~ 56234100 (+) |
| LOC110525039 | NA | coding | downstream | 181225 | 56321703 ~ 56328003 (+) |
| nr1h3 | nr1h3 | coding | downstream | 192227 | 56332705 ~ 56357630 (+) |
| LOC110526181 | madd | coding | downstream | 221553 | 56362031 ~ 56445865 (+) |
| LOC110526184 | LOC106587093 | coding | downstream | 413372 | 56553850 ~ 56562955 (+) |
| G524069 | NA | non-coding | upstream | 12108 | 56127519 ~ 56127821 (+) |
| G523959 | NA | non-coding | upstream | 169769 | 55969438 ~ 55970160 (+) |
| G524074 | LOC102208280 | non-coding | downstream | 218 | 56140696 ~ 56142206 (+) |
| G524139 | NA | non-coding | downstream | 137770 | 56278248 ~ 56281973 (+) |
| G524199 | NA | non-coding | downstream | 184459 | 56324937 ~ 56325170 (+) |
| G524303 | NA | non-coding | downstream | 443798 | 56584276 ~ 56589481 (+) |
| LOC110526167 | LOC106587078 | other | upstream | 573430 | 55563439 ~ 55568167 (+) |
| G523529 | NA | other | upstream | 655322 | 55484249 ~ 55484607 (+) |
| LOC110526161 | LOC106587065 | other | upstream | 1199056 | 54793125 ~ 54954478 (+) |
| G525645 | NA | other | downstream | 1435606 | 57576084 ~ 57581070 (+) |
| G525861 | LOC106587122 | other | downstream | 1463630 | 57604108 ~ 57606367 (+) |
| fbxo3 | fbxo3 | other | downstream | 1481370 | 57621795 ~ 57635241 (+) |
| LOC110526214 | LOC106587124 | other | downstream | 1498996 | 57639437 ~ 57642487 (+) |
| G525912 | NA | other | downstream | 1562980 | 57703458 ~ 57710340 (+) |
