G524199


Basic Information

Item Value
gene id G524199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 56324937 ~ 56325170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU594173
GGtaagggctctgggagtgtggtgccaggaaaataacctctcactcaacatcaacaaaactaaggagattatagtggacttcaggaaaccgcagagggagcatcccccatccacatcgatgggactgccgtggagaaggtggaaagcttcaagttccttagcgtacacatcactgacaaactgaaatggtccacccacacagacagtgtgttgaagaaggcgcaacagtgcctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU594173 True 234 lncRNA 0.50 1 56324937 56325170

Neighbor

gene id symbol gene type direction distance location
LOC110526177 LOC106587086 coding upstream 90837 56185132 ~ 56234100 (+)
LOC110526175 LOC106587084 coding upstream 204190 56020625 ~ 56120747 (+)
LOC110526173 LOC106587080 coding upstream 335483 55982270 ~ 55990919 (+)
LOC110526171 LOC106587080 coding upstream 344033 55971440 ~ 55980904 (+)
LOC110526172 LOC106561172 coding upstream 356846 55965222 ~ 55968091 (+)
nr1h3 nr1h3 coding downstream 7535 56332705 ~ 56357630 (+)
LOC110526181 madd coding downstream 36861 56362031 ~ 56445865 (+)
LOC110526184 LOC106587093 coding downstream 228680 56553850 ~ 56562955 (+)
ptpmt1 ptpmt1 coding downstream 621184 56946354 ~ 56951411 (+)
ndufs3 ndufs3 coding downstream 628964 56954134 ~ 56960155 (+)
G524139 NA non-coding upstream 42964 56278248 ~ 56281973 (+)
G524074 LOC102208280 non-coding upstream 182731 56140696 ~ 56142206 (+)
G524073 NA non-coding upstream 184459 56139929 ~ 56140478 (+)
G524069 NA non-coding upstream 197116 56127519 ~ 56127821 (+)
G524303 NA non-coding downstream 259106 56584276 ~ 56589481 (+)
G524371 NA non-coding downstream 351939 56677109 ~ 56756337 (+)
G524519 NA non-coding downstream 563379 56888549 ~ 56889643 (+)
G524521 NA non-coding downstream 567216 56892386 ~ 56892635 (+)
G524469 NA non-coding downstream 568075 56893245 ~ 56895396 (+)
LOC110526169 LOC106587076 other upstream 408991 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 758438 55563439 ~ 55568167 (+)
G523529 NA other upstream 840330 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 1384064 54793125 ~ 54954478 (+)
G525645 NA other downstream 1250914 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1278938 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1296678 57621795 ~ 57635241 (+)
LOC110526214 LOC106587124 other downstream 1314304 57639437 ~ 57642487 (+)
G525912 NA other downstream 1378288 57703458 ~ 57710340 (+)

Expression


Co-expression Network