Item | Value |
---|---|
gene id | G524303 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 56584276 ~ 56589481 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU594293 | True | 400 | lncRNA | 0.45 | 2 | 56584276 | 56589481 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526184 | LOC106587093 | coding | upstream | 21321 | 56553850 ~ 56562955 (+) |
LOC110526181 | madd | coding | upstream | 138411 | 56362031 ~ 56445865 (+) |
nr1h3 | nr1h3 | coding | upstream | 226646 | 56332705 ~ 56357630 (+) |
LOC110525039 | NA | coding | upstream | 256273 | 56321703 ~ 56328003 (+) |
LOC110526177 | LOC106587086 | coding | upstream | 350176 | 56185132 ~ 56234100 (+) |
ptpmt1 | ptpmt1 | coding | downstream | 356873 | 56946354 ~ 56951411 (+) |
ndufs3 | ndufs3 | coding | downstream | 364653 | 56954134 ~ 56960155 (+) |
LOC110526195 | LOC106587104 | coding | downstream | 499266 | 57088747 ~ 57196089 (+) |
LOC110526197 | LOC106587108 | coding | downstream | 672587 | 57262068 ~ 57277274 (+) |
LOC110526201 | LOC106587113 | coding | downstream | 918451 | 57507932 ~ 57550725 (+) |
G524199 | NA | non-coding | upstream | 259106 | 56324937 ~ 56325170 (+) |
G524139 | NA | non-coding | upstream | 302303 | 56278248 ~ 56281973 (+) |
G524074 | LOC102208280 | non-coding | upstream | 442070 | 56140696 ~ 56142206 (+) |
G524073 | NA | non-coding | upstream | 443798 | 56139929 ~ 56140478 (+) |
G524371 | NA | non-coding | downstream | 87628 | 56677109 ~ 56756337 (+) |
G524519 | NA | non-coding | downstream | 299068 | 56888549 ~ 56889643 (+) |
G524521 | NA | non-coding | downstream | 302905 | 56892386 ~ 56892635 (+) |
G524469 | NA | non-coding | downstream | 303764 | 56893245 ~ 56895396 (+) |
G524473 | NA | non-coding | downstream | 309695 | 56899176 ~ 56899420 (+) |
LOC110526175 | LOC106587084 | other | upstream | 463542 | 56020625 ~ 56120747 (+) |
LOC110526169 | LOC106587076 | other | upstream | 668330 | 55904064 ~ 55916081 (+) |
LOC110526167 | LOC106587078 | other | upstream | 1017777 | 55563439 ~ 55568167 (+) |
G523529 | NA | other | upstream | 1099669 | 55484249 ~ 55484607 (+) |
LOC110526161 | LOC106587065 | other | upstream | 1643403 | 54793125 ~ 54954478 (+) |
G525645 | NA | other | downstream | 986603 | 57576084 ~ 57581070 (+) |
G525861 | LOC106587122 | other | downstream | 1014627 | 57604108 ~ 57606367 (+) |
fbxo3 | fbxo3 | other | downstream | 1032367 | 57621795 ~ 57635241 (+) |
LOC110526214 | LOC106587124 | other | downstream | 1049993 | 57639437 ~ 57642487 (+) |
G525912 | NA | other | downstream | 1113977 | 57703458 ~ 57710340 (+) |