G524303



Basic Information


Item Value
gene id G524303
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 56584276 ~ 56589481 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU594293
ctatttctctctctgttcctgcttctgtctttgtcagattctcgtttgagtttctcatgccagaaccaaactatcgtctcgtttgcttcaaccttgtcctgtcctgtcggaatctgcctgttcatctgaggctacgtgtgatcaggtacctctgtcctctacaacccagctattctcctctgctgctagaaggggactctaacccagctattctcctctgctgctagaaggggaactcttctgtgatattcagaaggactttatgtttcatttgtcgccctctctgcgggttgtttattttgccatcatatacatttgaagaggatttatgtcttacctgtgttttgacattaaaggactctgtttttgttaaaccgcttttgggtcctcactcacgtgc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU594293 True 400 lncRNA 0.45 2 56584276 56589481

Neighbor


gene id symbol gene type direction distance location
LOC110526184 LOC106587093 coding upstream 21321 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 138411 56362031 ~ 56445865 (+)
nr1h3 nr1h3 coding upstream 226646 56332705 ~ 56357630 (+)
LOC110525039 NA coding upstream 256273 56321703 ~ 56328003 (+)
LOC110526177 LOC106587086 coding upstream 350176 56185132 ~ 56234100 (+)
ptpmt1 ptpmt1 coding downstream 356873 56946354 ~ 56951411 (+)
ndufs3 ndufs3 coding downstream 364653 56954134 ~ 56960155 (+)
LOC110526195 LOC106587104 coding downstream 499266 57088747 ~ 57196089 (+)
LOC110526197 LOC106587108 coding downstream 672587 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 918451 57507932 ~ 57550725 (+)
G524199 NA non-coding upstream 259106 56324937 ~ 56325170 (+)
G524139 NA non-coding upstream 302303 56278248 ~ 56281973 (+)
G524074 LOC102208280 non-coding upstream 442070 56140696 ~ 56142206 (+)
G524073 NA non-coding upstream 443798 56139929 ~ 56140478 (+)
G524371 NA non-coding downstream 87628 56677109 ~ 56756337 (+)
G524519 NA non-coding downstream 299068 56888549 ~ 56889643 (+)
G524521 NA non-coding downstream 302905 56892386 ~ 56892635 (+)
G524469 NA non-coding downstream 303764 56893245 ~ 56895396 (+)
G524473 NA non-coding downstream 309695 56899176 ~ 56899420 (+)
LOC110526175 LOC106587084 other upstream 463542 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 668330 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1017777 55563439 ~ 55568167 (+)
G523529 NA other upstream 1099669 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 1643403 54793125 ~ 54954478 (+)
G525645 NA other downstream 986603 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1014627 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1032367 57621795 ~ 57635241 (+)
LOC110526214 LOC106587124 other downstream 1049993 57639437 ~ 57642487 (+)
G525912 NA other downstream 1113977 57703458 ~ 57710340 (+)

Expression



Co-expression Network