Gene
RNA
| Item | Value |
|---|---|
| gene id | G524521 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 56892386 ~ 56892635 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU594514 | True | 250 | lncRNA | 0.43 | 1 | 56892386 | 56892635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526184 | LOC106587093 | coding | upstream | 329431 | 56553850 ~ 56562955 (+) |
| LOC110526181 | madd | coding | upstream | 446521 | 56362031 ~ 56445865 (+) |
| nr1h3 | nr1h3 | coding | upstream | 534756 | 56332705 ~ 56357630 (+) |
| LOC110525039 | NA | coding | upstream | 564383 | 56321703 ~ 56328003 (+) |
| LOC110526177 | LOC106587086 | coding | upstream | 658286 | 56185132 ~ 56234100 (+) |
| ptpmt1 | ptpmt1 | coding | downstream | 53719 | 56946354 ~ 56951411 (+) |
| ndufs3 | ndufs3 | coding | downstream | 61499 | 56954134 ~ 56960155 (+) |
| LOC110526195 | LOC106587104 | coding | downstream | 196112 | 57088747 ~ 57196089 (+) |
| LOC110526197 | LOC106587108 | coding | downstream | 369433 | 57262068 ~ 57277274 (+) |
| LOC110526201 | LOC106587113 | coding | downstream | 615297 | 57507932 ~ 57550725 (+) |
| G524519 | NA | non-coding | upstream | 2743 | 56888549 ~ 56889643 (+) |
| G524371 | NA | non-coding | upstream | 136049 | 56677109 ~ 56756337 (+) |
| G524303 | NA | non-coding | upstream | 302905 | 56584276 ~ 56589481 (+) |
| G524199 | NA | non-coding | upstream | 567216 | 56324937 ~ 56325170 (+) |
| G524139 | NA | non-coding | upstream | 610413 | 56278248 ~ 56281973 (+) |
| G524469 | NA | non-coding | downstream | 610 | 56893245 ~ 56895396 (+) |
| G524473 | NA | non-coding | downstream | 6541 | 56899176 ~ 56899420 (+) |
| G524470 | NA | non-coding | downstream | 7344 | 56899979 ~ 56900254 (+) |
| G524472 | NA | non-coding | downstream | 13518 | 56906153 ~ 56906394 (+) |
| G524555 | c1qtnf4 | non-coding | downstream | 68128 | 56960763 ~ 56972189 (+) |
| LOC110526175 | LOC106587084 | other | upstream | 771652 | 56020625 ~ 56120747 (+) |
| LOC110526169 | LOC106587076 | other | upstream | 976440 | 55904064 ~ 55916081 (+) |
| LOC110526167 | LOC106587078 | other | upstream | 1325887 | 55563439 ~ 55568167 (+) |
| G523529 | NA | other | upstream | 1407779 | 55484249 ~ 55484607 (+) |
| LOC110526161 | LOC106587065 | other | upstream | 1951513 | 54793125 ~ 54954478 (+) |
| G525645 | NA | other | downstream | 683449 | 57576084 ~ 57581070 (+) |
| G525861 | LOC106587122 | other | downstream | 711473 | 57604108 ~ 57606367 (+) |
| fbxo3 | fbxo3 | other | downstream | 729213 | 57621795 ~ 57635241 (+) |
| LOC110526214 | LOC106587124 | other | downstream | 746839 | 57639437 ~ 57642487 (+) |
| G525912 | NA | other | downstream | 810823 | 57703458 ~ 57710340 (+) |
