XLOC_024395 (BX957346.3)


Basic Information

Item Value
gene id XLOC_024395
gene name BX957346.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 2672491 ~ 2685982 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00048232
CTCTGATTTcacttttttgtacattaaatcactttggttggcagttttgttgtttgtgtctttTACTTTCGTCCATCACTTGTAAAAGTACCACACCTTTAAAACGTTATTACTTTTACCCAAGACTAACATCCAAGAGTCAAAGAGGTTGTAACAATGTGTATTGAGACCTACTCCACAGCGCTCTTGTAGACGTCGATGGCTTTCTCTGTGTCCCCCTGCAACACGGAGAGAACAGAAACCCAGCTGAAGACGTGTGAAAACAAGATAAGACGGTTCAATAAAGTCTCATAATCCTTGCGGATATAATGCAGATGTATGAGCCAGTTTCTTTTCTCCAGGATGGGAAGCTCAGGAGCTGCagataaaatatatactttaaaaatattatatactttatatagtaGATCTATATATGAACATATAACAATGTAGAGTGATGCACAACAGAGTCtcctaaatcatatttgaagtcTTTATGAACATTGTAAATGATCCTAA
>TCONS_00049074
ttttgttgtttgtgtctttTACTTTCGTCCATCACTTGTAAAAGTACCACACCTTTAAAACGTTATTACTTTTACCCAAGACTAACATCCAAGAGTCAAAGAGGTTGTAACAATGTGTATTGAGACCTACTCCACAGCGCTCTTGTAGACGTCGATGGCTTTCTCTGTGTCCCCCTGCAACACGGAGAGAACAGAAACCCAGCTGAAGACGTGTGAAAACAAGATAAGACGGTTCAATAAAGTATGTAACCCAATATCATGGCCAATATTCACAAAGACATGACTGAACAGACAGAATCATAGTTTTTAGGCTGGATGAACCTACACTCCTGAAGTCTTTGGTGTAGATGTAGCAAACGCCCAGATTATGGCTGATCTCCTGTGGGTAAAAATAACCACATATTTATTCAGTGCTTTACATACATCTTATTTGTTTATTGgcaaaatatacactacctgacaaaagtcttgtcgcctattcaagtttaaGAAaccac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097734

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00048232 False 501 lncRNA 0.36 3 2672491 2685982
TCONS_00049074 True 497 lncRNA 0.39 2 2685357 2685938

Neighbor

gene id symbol gene type direction distance location
XLOC_024394 BX957346.1 coding downstream 33674 2546343 ~ 2638817 (-)
XLOC_024393 NA coding downstream 187443 2483112 ~ 2485048 (-)
XLOC_024392 mrps35 coding downstream 317384 2333258 ~ 2355107 (-)
XLOC_024391 NA coding downstream 359458 2309414 ~ 2313033 (-)
XLOC_024390 NA coding downstream 372742 2275525 ~ 2299749 (-)
XLOC_024396 adpgk coding upstream 20740 2706722 ~ 2724033 (-)
XLOC_024397 scamp2 coding upstream 329694 3015676 ~ 3034668 (-)
XLOC_024398 si:ch1073-296i8.2 coding upstream 361147 3047129 ~ 3058722 (-)
XLOC_024399 best1 coding upstream 383689 3069671 ~ 3087556 (-)
XLOC_024400 epx coding upstream 433828 3119810 ~ 3139805 (-)
XLOC_024389 NA non-coding downstream 507457 2126816 ~ 2165034 (-)
XLOC_024405 NA non-coding upstream 616542 3302524 ~ 3306305 (-)
XLOC_024407 NA non-coding upstream 691841 3377823 ~ 3393705 (-)
XLOC_024410 NA non-coding upstream 844485 3530467 ~ 3531168 (-)
XLOC_024415 NA non-coding upstream 1060182 3746164 ~ 3747949 (-)
XLOC_024421 NA non-coding upstream 1194740 3880722 ~ 3884430 (-)

Expression


Co-expression Network