G525598


Basic Information

Item Value
gene id G525598
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57124583 ~ 57124805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595674
cagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaatccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcataaaagcaacacagctgaacac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595674 True 223 lncRNA 0.40 1 57124583 57124805

Neighbor

gene id symbol gene type direction distance location
ndufs3 ndufs3 coding upstream 164428 56954134 ~ 56960155 (+)
ptpmt1 ptpmt1 coding upstream 173172 56946354 ~ 56951411 (+)
LOC110526184 LOC106587093 coding upstream 561628 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 678718 56362031 ~ 56445865 (+)
nr1h3 nr1h3 coding upstream 766953 56332705 ~ 56357630 (+)
LOC110526197 LOC106587108 coding downstream 137263 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 383127 57507932 ~ 57550725 (+)
atg13 LOC106587118 coding downstream 433720 57558525 ~ 57568473 (+)
LOC110526205 LOC106587121 coding downstream 462788 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 496990 57621795 ~ 57635241 (+)
G525595 NA non-coding upstream 10353 57113974 ~ 57114230 (+)
G525590 NA non-coding upstream 14833 57109520 ~ 57109750 (+)
G524577 LOC106587102 non-coding upstream 131130 56990543 ~ 56993453 (+)
G524555 c1qtnf4 non-coding upstream 152394 56960763 ~ 56972189 (+)
G524472 NA non-coding upstream 218189 56906153 ~ 56906394 (+)
G525600 NA non-coding downstream 1600 57126405 ~ 57126693 (+)
G525602 NA non-coding downstream 2692 57127497 ~ 57127728 (+)
G525606 NA non-coding downstream 10480 57135285 ~ 57135519 (+)
G525611 NA non-coding downstream 16876 57141681 ~ 57141915 (+)
G525613 NA non-coding downstream 17878 57142683 ~ 57143119 (+)
LOC110526175 LOC106587084 other upstream 1003849 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1208637 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1558084 55563439 ~ 55568167 (+)
G523529 NA other upstream 1639976 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2183710 54793125 ~ 54954478 (+)
G525645 NA other downstream 451279 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 479303 57604108 ~ 57606367 (+)
LOC110526214 LOC106587124 other downstream 514669 57639437 ~ 57642487 (+)
G525912 NA other downstream 578653 57703458 ~ 57710340 (+)

Expression


Co-expression Network