Gene
RNA
| Item | Value |
|---|---|
| gene id | G525600 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 57126405 ~ 57126693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU595676 | True | 289 | lncRNA | 0.46 | 1 | 57126405 | 57126693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ndufs3 | ndufs3 | coding | upstream | 166250 | 56954134 ~ 56960155 (+) |
| ptpmt1 | ptpmt1 | coding | upstream | 174994 | 56946354 ~ 56951411 (+) |
| LOC110526184 | LOC106587093 | coding | upstream | 563450 | 56553850 ~ 56562955 (+) |
| LOC110526181 | madd | coding | upstream | 680540 | 56362031 ~ 56445865 (+) |
| nr1h3 | nr1h3 | coding | upstream | 768775 | 56332705 ~ 56357630 (+) |
| LOC110526197 | LOC106587108 | coding | downstream | 135375 | 57262068 ~ 57277274 (+) |
| LOC110526201 | LOC106587113 | coding | downstream | 381239 | 57507932 ~ 57550725 (+) |
| atg13 | LOC106587118 | coding | downstream | 431832 | 57558525 ~ 57568473 (+) |
| LOC110526205 | LOC106587121 | coding | downstream | 460900 | 57587593 ~ 57591339 (+) |
| fbxo3 | fbxo3 | coding | downstream | 495102 | 57621795 ~ 57635241 (+) |
| G525598 | NA | non-coding | upstream | 1600 | 57124583 ~ 57124805 (+) |
| G525595 | NA | non-coding | upstream | 12175 | 57113974 ~ 57114230 (+) |
| G525590 | NA | non-coding | upstream | 16655 | 57109520 ~ 57109750 (+) |
| G524577 | LOC106587102 | non-coding | upstream | 132952 | 56990543 ~ 56993453 (+) |
| G524555 | c1qtnf4 | non-coding | upstream | 154216 | 56960763 ~ 56972189 (+) |
| G525602 | NA | non-coding | downstream | 804 | 57127497 ~ 57127728 (+) |
| G525606 | NA | non-coding | downstream | 8592 | 57135285 ~ 57135519 (+) |
| G525611 | NA | non-coding | downstream | 14988 | 57141681 ~ 57141915 (+) |
| G525613 | NA | non-coding | downstream | 15990 | 57142683 ~ 57143119 (+) |
| G525615 | NA | non-coding | downstream | 17521 | 57144214 ~ 57144432 (+) |
| LOC110526175 | LOC106587084 | other | upstream | 1005671 | 56020625 ~ 56120747 (+) |
| LOC110526169 | LOC106587076 | other | upstream | 1210459 | 55904064 ~ 55916081 (+) |
| LOC110526167 | LOC106587078 | other | upstream | 1559906 | 55563439 ~ 55568167 (+) |
| G523529 | NA | other | upstream | 1641798 | 55484249 ~ 55484607 (+) |
| LOC110526161 | LOC106587065 | other | upstream | 2185532 | 54793125 ~ 54954478 (+) |
| G525645 | NA | other | downstream | 449391 | 57576084 ~ 57581070 (+) |
| G525861 | LOC106587122 | other | downstream | 477415 | 57604108 ~ 57606367 (+) |
| LOC110526214 | LOC106587124 | other | downstream | 512781 | 57639437 ~ 57642487 (+) |
| G525912 | NA | other | downstream | 576765 | 57703458 ~ 57710340 (+) |
