Gene
RNA
| Item | Value |
|---|---|
| gene id | G525625 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 57168358 ~ 57168594 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU595701 | True | 237 | lncRNA | 0.38 | 1 | 57168358 | 57168594 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ndufs3 | ndufs3 | coding | upstream | 208203 | 56954134 ~ 56960155 (+) |
| ptpmt1 | ptpmt1 | coding | upstream | 216947 | 56946354 ~ 56951411 (+) |
| LOC110526184 | LOC106587093 | coding | upstream | 605403 | 56553850 ~ 56562955 (+) |
| LOC110526181 | madd | coding | upstream | 722493 | 56362031 ~ 56445865 (+) |
| nr1h3 | nr1h3 | coding | upstream | 810728 | 56332705 ~ 56357630 (+) |
| LOC110526197 | LOC106587108 | coding | downstream | 93474 | 57262068 ~ 57277274 (+) |
| LOC110526201 | LOC106587113 | coding | downstream | 339338 | 57507932 ~ 57550725 (+) |
| atg13 | LOC106587118 | coding | downstream | 389931 | 57558525 ~ 57568473 (+) |
| LOC110526205 | LOC106587121 | coding | downstream | 418999 | 57587593 ~ 57591339 (+) |
| fbxo3 | fbxo3 | coding | downstream | 453201 | 57621795 ~ 57635241 (+) |
| G525623 | NA | non-coding | upstream | 9550 | 57158586 ~ 57158808 (+) |
| G525615 | NA | non-coding | upstream | 23926 | 57144214 ~ 57144432 (+) |
| G525613 | NA | non-coding | upstream | 25239 | 57142683 ~ 57143119 (+) |
| G525611 | NA | non-coding | upstream | 26443 | 57141681 ~ 57141915 (+) |
| G525606 | NA | non-coding | upstream | 32839 | 57135285 ~ 57135519 (+) |
| G525627 | NA | non-coding | downstream | 25180 | 57193774 ~ 57193984 (+) |
| G525581 | NA | non-coding | downstream | 31338 | 57199932 ~ 57200947 (+) |
| G525583 | NA | non-coding | downstream | 33062 | 57201656 ~ 57201826 (+) |
| G525663 | NA | non-coding | downstream | 64500 | 57233094 ~ 57233306 (+) |
| G525667 | NA | non-coding | downstream | 68254 | 57236848 ~ 57237071 (+) |
| LOC110526175 | LOC106587084 | other | upstream | 1047624 | 56020625 ~ 56120747 (+) |
| LOC110526169 | LOC106587076 | other | upstream | 1252412 | 55904064 ~ 55916081 (+) |
| LOC110526167 | LOC106587078 | other | upstream | 1601859 | 55563439 ~ 55568167 (+) |
| G523529 | NA | other | upstream | 1683751 | 55484249 ~ 55484607 (+) |
| LOC110526161 | LOC106587065 | other | upstream | 2227485 | 54793125 ~ 54954478 (+) |
| G525645 | NA | other | downstream | 407490 | 57576084 ~ 57581070 (+) |
| G525861 | LOC106587122 | other | downstream | 435514 | 57604108 ~ 57606367 (+) |
| LOC110526214 | LOC106587124 | other | downstream | 470880 | 57639437 ~ 57642487 (+) |
| G525912 | NA | other | downstream | 534864 | 57703458 ~ 57710340 (+) |
