G525627


Basic Information

Item Value
gene id G525627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57193774 ~ 57193984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595703
CTTCGATCACGTCATGCTTGCCACTTTCACCTTCCCTCAAATAGTTTATACTGTCTGGTTACATTTATGGAGTGAGTTTCTCAACCGCCAAGCAGAGGACATGCATCTGTGTAGAAGTGGAAATAGTTTTTGTTTTTCATGTGTGTATTGTAGTTAGGTGCAAACAACATGTTGAGCAAGTAGAACATTGCAAAGTAAATCCAACATTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595703 True 211 lncRNA 0.39 1 57193774 57193984

Neighbor

gene id symbol gene type direction distance location
ndufs3 ndufs3 coding upstream 233619 56954134 ~ 56960155 (+)
ptpmt1 ptpmt1 coding upstream 242363 56946354 ~ 56951411 (+)
LOC110526184 LOC106587093 coding upstream 630819 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 747909 56362031 ~ 56445865 (+)
nr1h3 nr1h3 coding upstream 836144 56332705 ~ 56357630 (+)
LOC110526197 LOC106587108 coding downstream 68084 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 313948 57507932 ~ 57550725 (+)
atg13 LOC106587118 coding downstream 364541 57558525 ~ 57568473 (+)
LOC110526205 LOC106587121 coding downstream 393609 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 427811 57621795 ~ 57635241 (+)
G525625 NA non-coding upstream 25180 57168358 ~ 57168594 (+)
G525623 NA non-coding upstream 34966 57158586 ~ 57158808 (+)
G525615 NA non-coding upstream 49342 57144214 ~ 57144432 (+)
G525613 NA non-coding upstream 50655 57142683 ~ 57143119 (+)
G525611 NA non-coding upstream 51859 57141681 ~ 57141915 (+)
G525581 NA non-coding downstream 5948 57199932 ~ 57200947 (+)
G525583 NA non-coding downstream 7672 57201656 ~ 57201826 (+)
G525663 NA non-coding downstream 39110 57233094 ~ 57233306 (+)
G525667 NA non-coding downstream 42864 57236848 ~ 57237071 (+)
G525671 NA non-coding downstream 46681 57240665 ~ 57240883 (+)
LOC110526175 LOC106587084 other upstream 1073040 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1277828 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1627275 55563439 ~ 55568167 (+)
G523529 NA other upstream 1709167 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2252901 54793125 ~ 54954478 (+)
G525645 NA other downstream 382100 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 410124 57604108 ~ 57606367 (+)
LOC110526214 LOC106587124 other downstream 445490 57639437 ~ 57642487 (+)
G525912 NA other downstream 509474 57703458 ~ 57710340 (+)

Expression


Co-expression Network