G525583


Basic Information

Item Value
gene id G525583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57201656 ~ 57201826 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595659
TTTTGTATTCAGTAATTTGAACAATACAATGTCATTGGGGGCAGTCATGTTCACAGTACAGAATACTGTGCACAGGATCTTCAAGACTGACCTCCTGCTCTTGAGAGCTTGGACCTAGTGGTAACATTGGATGGAAATAATGATCTTTCTACGGATATTTTTGCTTGCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595659 True 171 lncRNA 0.40 1 57201656 57201826

Neighbor

gene id symbol gene type direction distance location
LOC110526195 LOC106587104 coding upstream 5567 57088747 ~ 57196089 (+)
ndufs3 ndufs3 coding upstream 241501 56954134 ~ 56960155 (+)
ptpmt1 ptpmt1 coding upstream 250245 56946354 ~ 56951411 (+)
LOC110526184 LOC106587093 coding upstream 638701 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 755791 56362031 ~ 56445865 (+)
LOC110526197 LOC106587108 coding downstream 60242 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 306106 57507932 ~ 57550725 (+)
atg13 LOC106587118 coding downstream 356699 57558525 ~ 57568473 (+)
LOC110526205 LOC106587121 coding downstream 385767 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 419969 57621795 ~ 57635241 (+)
G525581 NA non-coding upstream 709 57199932 ~ 57200947 (+)
G525627 NA non-coding upstream 7672 57193774 ~ 57193984 (+)
G525625 NA non-coding upstream 33062 57168358 ~ 57168594 (+)
G525623 NA non-coding upstream 42848 57158586 ~ 57158808 (+)
G525615 NA non-coding upstream 57224 57144214 ~ 57144432 (+)
G525663 NA non-coding downstream 31268 57233094 ~ 57233306 (+)
G525667 NA non-coding downstream 35022 57236848 ~ 57237071 (+)
G525671 NA non-coding downstream 38839 57240665 ~ 57240883 (+)
G525698 NA non-coding downstream 75769 57277595 ~ 57278035 (+)
G525643 LOC106587109 non-coding downstream 78781 57280607 ~ 57293416 (+)
LOC110526175 LOC106587084 other upstream 1080922 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1285710 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1635157 55563439 ~ 55568167 (+)
G523529 NA other upstream 1717049 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2260783 54793125 ~ 54954478 (+)
G525645 NA other downstream 374258 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 402282 57604108 ~ 57606367 (+)
LOC110526214 LOC106587124 other downstream 437648 57639437 ~ 57642487 (+)
G525912 NA other downstream 501632 57703458 ~ 57710340 (+)

Expression


Co-expression Network