G525667


Basic Information

Item Value
gene id G525667
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57236848 ~ 57237071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595743
GTGATGTCTCATGAGCCCACATCTGTCACTGCTAGGCCTGGGAAACTCAGTACAGAGTAAGTAAATAAGACATCATGGAATTTAGTTCTTACCAAATGACTTTGGACTCCTGTAAAGAAAGTCTATTGGGCTCAGTGAGCTCCCTCCTCATACTTCCTGTAATTCTATTGCACCTTGGAATTTTTCCAgtatgtattacattttttttacgtCCTTCTCCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595743 True 224 lncRNA 0.42 1 57236848 57237071

Neighbor

gene id symbol gene type direction distance location
LOC110526195 LOC106587104 coding upstream 40759 57088747 ~ 57196089 (+)
ndufs3 ndufs3 coding upstream 276693 56954134 ~ 56960155 (+)
ptpmt1 ptpmt1 coding upstream 285437 56946354 ~ 56951411 (+)
LOC110526184 LOC106587093 coding upstream 673893 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 790983 56362031 ~ 56445865 (+)
LOC110526197 LOC106587108 coding downstream 24997 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 270861 57507932 ~ 57550725 (+)
atg13 LOC106587118 coding downstream 321454 57558525 ~ 57568473 (+)
LOC110526205 LOC106587121 coding downstream 350522 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 384724 57621795 ~ 57635241 (+)
G525663 NA non-coding upstream 3542 57233094 ~ 57233306 (+)
G525583 NA non-coding upstream 35022 57201656 ~ 57201826 (+)
G525581 NA non-coding upstream 35901 57199932 ~ 57200947 (+)
G525627 NA non-coding upstream 42864 57193774 ~ 57193984 (+)
G525625 NA non-coding upstream 68254 57168358 ~ 57168594 (+)
G525671 NA non-coding downstream 3594 57240665 ~ 57240883 (+)
G525698 NA non-coding downstream 40524 57277595 ~ 57278035 (+)
G525643 LOC106587109 non-coding downstream 43536 57280607 ~ 57293416 (+)
G525799 NA non-coding downstream 192532 57429603 ~ 57432552 (+)
G525654 znf408 non-coding downstream 344741 57581812 ~ 57584090 (+)
LOC110526175 LOC106587084 other upstream 1116114 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1320902 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1670349 55563439 ~ 55568167 (+)
G523529 NA other upstream 1752241 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2295975 54793125 ~ 54954478 (+)
G525645 NA other downstream 339013 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 367037 57604108 ~ 57606367 (+)
LOC110526214 LOC106587124 other downstream 402403 57639437 ~ 57642487 (+)
G525912 NA other downstream 466387 57703458 ~ 57710340 (+)

Expression


Co-expression Network