G525671


Basic Information

Item Value
gene id G525671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57240665 ~ 57240883 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595747
GGAGTCCTGCAGCTGACGAGGCTTTCCGCCTACTTAAGGGACGTTTCACCTCTGCCCCATTGCTCAAACACCACCCTTTGTGGTGGAGGTGGATGCTTCAGAGGTGGGTGTGGGGGCTCTCCTGTCTCAATGACAAGGTAAACCACAAAAATTGTATCCTTGTGCTTATTACTCTCTTGTCTCCTACAAGAGAGGAATTATGATGGCCGCGATTGAGCG

Function

NR:

description
PREDICTED: uncharacterized mitochondrial protein AtMg00860-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595747 True 219 lncRNA 0.51 1 57240665 57240883

Neighbor

gene id symbol gene type direction distance location
LOC110526195 LOC106587104 coding upstream 44576 57088747 ~ 57196089 (+)
ndufs3 ndufs3 coding upstream 280510 56954134 ~ 56960155 (+)
ptpmt1 ptpmt1 coding upstream 289254 56946354 ~ 56951411 (+)
LOC110526184 LOC106587093 coding upstream 677710 56553850 ~ 56562955 (+)
LOC110526181 madd coding upstream 794800 56362031 ~ 56445865 (+)
LOC110526197 LOC106587108 coding downstream 21185 57262068 ~ 57277274 (+)
LOC110526201 LOC106587113 coding downstream 267049 57507932 ~ 57550725 (+)
atg13 LOC106587118 coding downstream 317642 57558525 ~ 57568473 (+)
LOC110526205 LOC106587121 coding downstream 346710 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 380912 57621795 ~ 57635241 (+)
G525667 NA non-coding upstream 3594 57236848 ~ 57237071 (+)
G525663 NA non-coding upstream 7359 57233094 ~ 57233306 (+)
G525583 NA non-coding upstream 38839 57201656 ~ 57201826 (+)
G525581 NA non-coding upstream 39718 57199932 ~ 57200947 (+)
G525627 NA non-coding upstream 46681 57193774 ~ 57193984 (+)
G525698 NA non-coding downstream 36712 57277595 ~ 57278035 (+)
G525643 LOC106587109 non-coding downstream 39724 57280607 ~ 57293416 (+)
G525799 NA non-coding downstream 188720 57429603 ~ 57432552 (+)
G525654 znf408 non-coding downstream 340929 57581812 ~ 57584090 (+)
G525656 NA non-coding downstream 344635 57585518 ~ 57587316 (+)
LOC110526175 LOC106587084 other upstream 1119931 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1324719 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 1674166 55563439 ~ 55568167 (+)
G523529 NA other upstream 1756058 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2299792 54793125 ~ 54954478 (+)
G525645 NA other downstream 335201 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 363225 57604108 ~ 57606367 (+)
LOC110526214 LOC106587124 other downstream 398591 57639437 ~ 57642487 (+)
G525912 NA other downstream 462575 57703458 ~ 57710340 (+)

Expression


Co-expression Network