G525645


Basic Information

Item Value
gene id G525645
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57576084 ~ 57581070 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595721
tgaTCAGGAACACACGTTTATTTCCAATATTACATCAGTTTGCATGTAGAGAAAATGAGATGAGAAGAAATAACaatcaatcatcatcatcaccgccTGTTTTGTCAATAACTTTCTTCATCCACCTTCTCATACGGAAAAGATGGGTGTAGAATCCATATTTCCCATCCCTGTCACATCCTTCTCCCCAGGACACAATGCCGATCTGATACCAACGGTTGTCATCTGGGTTCTGTGAATGAGGATACAAGTCATTCTCATGCGTATATCAAATATAAAGGGGAATATGCAAGACATCTAATGAGTGAAGTTCGTGTTTCTCTAGTTGTATACCTTCATGACAAAGGGACCACCGCTGTCCCCTTCACAAGCATCACCAGTTTTCTGTTCCTCTGGTTTGAAGCCAGCACAGAACATGTTGTCAGTGATGCGGATAGAGGTAGAGGCTCTGCAGATATCCTGTTCAACGATGGGTAGATGGATCTGCTGGAGAACTGTGGGTTGAGACTTGGGGGAGGAAGTCCATGTCTCATAAAGGTTCCCCCAGCCTGTCACACGGCCTTTATAGCCAGCAAACATCAGTGTCTTAGCAACCTGCTTGGTTGGTAGACAGACAGGATGAATCTCATCAGTGAAAGTAACGGGCCTCCTCATGTGCAGCAGAGCAATGTCCCGGTTCAGGTTCTCCTTCCAGTTGTACTTGGGGTGGACAATTATCTCATCAATGGCCACAATCTTCTCTGTGCCCTTCTCAAACTTAGCTCTGTTATGTTTGCCAAGACGGACCAGGATGTCATTGATGGTGAAGTTTTTGTTCCATGGTGGGTAGAGGATGCAGTGGGCTGCAGTGAGGATCCACTCATCACTGATTAGACTGGCCCCACACAGAAGCTCCTGGGGGCTTTTCTTGTACAACATCACCTGCCATGGTGCACTGGCCACCTCTGCATCAATCCCTTTAACAATACGGCCTCCTTGGTAGGAGTCAATCAGTTCTTGCTCTCTACCGTCCTTCTTACTTATCTTCTCAAACATGGGTCGCTCCCCGCACACCATCTCTCCACTGCCAAAGCTCCGAGGGCTGAAGAAGGTTTTTCTGGGCCCAGAGAGTGTTGTCCTTTCCCTTCCGCCAGCCGCCTCCTCATAGTTATCTATTGGGTCATCACACATGTCAAGGTCACAGTAGTCCACAGTGGTATTTCCATGCTGGTCCACAAAGCACCAGGGTCCCTCCATATCTCCGTCAGGGTTTCTACAGTGGTTCGCCACAAGTTTGACCTCTGGGATGAAATCCTTTCCTTTTCTGAGTGCCAATGCCTCTGGGGAGGCCCAAGGCAGACACTTTTGGCCGTTCATGGTAACTGAGAGATCCCCAGTATAATCCAAGCCATTGTTGGCCATGCAGTCCTTCTTGGTGTACGTGGCTTTCCCATCCACTGCAGCGGGTACTTTTGGGGGTACCCAAGGCTCCCCACATTTTGGAACGATACATTGCTCTCTCCTGACTGTGGGATCCCTGGTGAAGCACCAAGGTCCTTCAGGAGTTTTGTCTGGGTTCCTGCAATAGTTCTCATACAGGGTCTCATCCAGCAACGTATTGAACTCCGTAATTCTGTGTGGGAAGTTACTGGACCAGTACTGGCATGTTTTTCCTGAGGAAGTAGTGAAGATGGTGCCGTTGTAGTTCTCACCAATGCCCACTGAGCACCATCCATCGAGATGAATACACCCCCTCACTGTGTTTATATTGTCCTTGGTTCTCAGCAGTGAAGTGCCTTTGCAAGCCAAATAGTTGCCCCAAAAGGCCTTCGTCTTGTCAGGCTTTTCAAAGACTTCACGGGCTTCTTCATGGTCACAGATCTCCTCGATGCACTCCCGTTCCAAGTTCCCAGGTTTCAACTCCTCAAGGAAGGAATTTGCCCGTTTAGCACGGATAAAAACCTGTGAGGCCTCTTTGCTATTAAGAAATACATTTTCACAAAGTGTGATCTGAAGAGTAGAAGAAAATAGTAGAGTGAAAATGAGAGTTGCGGGTATTTGACCCATTCTTATGGATAGTTAAGACAGAACTCCTTGCAAAACCTAGGACATCACCAAACCTTCTCACCCCTTCAAAATCCAGTACTCATTGAAACACCCCACTTTCTGTTACATTGAATCCACCTGGTT

Function

NR:

description
prothrombin

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU595721 True 2169 TUCP 0.47 13 57576084 57581070

Neighbor

gene id symbol gene type direction distance location
atg13 LOC106587118 coding upstream 7611 57558525 ~ 57568473 (+)
LOC110526201 LOC106587113 coding upstream 25359 57507932 ~ 57550725 (+)
LOC110526197 LOC106587108 coding upstream 298810 57262068 ~ 57277274 (+)
LOC110526195 LOC106587104 coding upstream 379995 57088747 ~ 57196089 (+)
ndufs3 ndufs3 coding upstream 615929 56954134 ~ 56960155 (+)
LOC110526205 LOC106587121 coding downstream 6523 57587593 ~ 57591339 (+)
fbxo3 fbxo3 coding downstream 40725 57621795 ~ 57635241 (+)
LOC110526214 LOC106587124 coding downstream 58367 57639437 ~ 57642487 (+)
aplnr2 LOC106586995 coding downstream 63597 57644667 ~ 57647053 (+)
psmc3 psmc3 coding downstream 68862 57649932 ~ 57659929 (+)
G525799 NA non-coding upstream 143532 57429603 ~ 57432552 (+)
G525643 LOC106587109 non-coding upstream 282668 57280607 ~ 57293416 (+)
G525698 NA non-coding upstream 298049 57277595 ~ 57278035 (+)
G525671 NA non-coding upstream 335201 57240665 ~ 57240883 (+)
G525667 NA non-coding upstream 339013 57236848 ~ 57237071 (+)
G525654 znf408 non-coding downstream 742 57581812 ~ 57584090 (+)
G525656 NA non-coding downstream 4448 57585518 ~ 57587316 (+)
G525647 NA non-coding downstream 11584 57592654 ~ 57594166 (+)
G525655 NA non-coding downstream 13331 57594401 ~ 57594669 (+)
G525897 NA non-coding downstream 100918 57681988 ~ 57682196 (+)
LOC110526175 LOC106587084 other upstream 1455350 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1660138 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 2009585 55563439 ~ 55568167 (+)
G523529 NA other upstream 2091477 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 2635211 54793125 ~ 54954478 (+)
G525861 LOC106587122 other downstream 23038 57604108 ~ 57606367 (+)
G525912 NA other downstream 122388 57703458 ~ 57710340 (+)
G525972 NA other downstream 236754 57817824 ~ 57818280 (+)

Expression


Co-expression Network