G525655


Basic Information

Item Value
gene id G525655
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57594401 ~ 57594669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595731
tatgtattattaaaGTCTTATGTATTGTTGAAGACTATAGAAAGTCGCATACATGTTTATATAATAAGGGTTGTGTCTTTGGCATCCACAGTTCACTTTTCTACATTTCACTTGGAAAATATACTGTATCTCACTTCCCGCGAGTGCCATTATTTTTTAATGCCAACTGATTATTTATAGGTGCTTTAAGTCGAACCCAGTCTGTATTGAGCTAGAACATTTGAAACTGTGGCTTATTAGTCAAAATAAACCTCTTGGTTCGAGCTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595731 True 269 lncRNA 0.34 1 57594401 57594669

Neighbor

gene id symbol gene type direction distance location
LOC110526205 LOC106587121 coding upstream 3062 57587593 ~ 57591339 (+)
atg13 LOC106587118 coding upstream 25928 57558525 ~ 57568473 (+)
LOC110526201 LOC106587113 coding upstream 43676 57507932 ~ 57550725 (+)
LOC110526197 LOC106587108 coding upstream 317127 57262068 ~ 57277274 (+)
LOC110526195 LOC106587104 coding upstream 398312 57088747 ~ 57196089 (+)
fbxo3 fbxo3 coding downstream 27126 57621795 ~ 57635241 (+)
LOC110526214 LOC106587124 coding downstream 44768 57639437 ~ 57642487 (+)
aplnr2 LOC106586995 coding downstream 49998 57644667 ~ 57647053 (+)
psmc3 psmc3 coding downstream 55263 57649932 ~ 57659929 (+)
LOC110526217 hce2 coding downstream 118492 57713161 ~ 57716278 (+)
G525647 NA non-coding upstream 235 57592654 ~ 57594166 (+)
G525656 NA non-coding upstream 7085 57585518 ~ 57587316 (+)
G525654 znf408 non-coding upstream 10311 57581812 ~ 57584090 (+)
G525799 NA non-coding upstream 161849 57429603 ~ 57432552 (+)
G525643 LOC106587109 non-coding upstream 300985 57280607 ~ 57293416 (+)
G525897 NA non-coding downstream 87319 57681988 ~ 57682196 (+)
G525903 NA non-coding downstream 99963 57694632 ~ 57694840 (+)
G525905 NA non-coding downstream 100599 57695268 ~ 57695488 (+)
G525908 NA non-coding downstream 103781 57698450 ~ 57698764 (+)
G525969 NA non-coding downstream 216071 57810740 ~ 57810945 (+)
G525645 NA other upstream 13331 57576084 ~ 57581070 (+)
LOC110526175 LOC106587084 other upstream 1473667 56020625 ~ 56120747 (+)
LOC110526169 LOC106587076 other upstream 1678455 55904064 ~ 55916081 (+)
LOC110526167 LOC106587078 other upstream 2027902 55563439 ~ 55568167 (+)
G523529 NA other upstream 2109794 55484249 ~ 55484607 (+)
G525861 LOC106587122 other downstream 9439 57604108 ~ 57606367 (+)
G525912 NA other downstream 108789 57703458 ~ 57710340 (+)
G525972 NA other downstream 223155 57817824 ~ 57818280 (+)

Expression


Co-expression Network