G525897


Basic Information

Item Value
gene id G525897
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57681988 ~ 57682196 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU595991
aagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagcattaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagatcactgcaaatctaccaagacctggccgtccctctaaactttcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU595991 True 209 lncRNA 0.44 1 57681988 57682196

Neighbor

gene id symbol gene type direction distance location
psmc3 psmc3 coding upstream 22059 57649932 ~ 57659929 (+)
aplnr2 LOC106586995 coding upstream 34935 57644667 ~ 57647053 (+)
LOC110526214 LOC106587124 coding upstream 39501 57639437 ~ 57642487 (+)
fbxo3 fbxo3 coding upstream 46747 57621795 ~ 57635241 (+)
LOC110526205 LOC106587121 coding upstream 90649 57587593 ~ 57591339 (+)
LOC110526217 hce2 coding downstream 30965 57713161 ~ 57716278 (+)
LOC110526219 LOC106587128 coding downstream 47248 57729444 ~ 57734935 (+)
LOC110526218 LOC106587128 coding downstream 61936 57744132 ~ 57760940 (+)
LOC110526223 LOC106561972 coding downstream 160798 57842994 ~ 57863756 (+)
fgf3 LOC106587135 coding downstream 234149 57916345 ~ 57921070 (+)
G525655 NA non-coding upstream 87319 57594401 ~ 57594669 (+)
G525647 NA non-coding upstream 87822 57592654 ~ 57594166 (+)
G525656 NA non-coding upstream 94672 57585518 ~ 57587316 (+)
G525654 znf408 non-coding upstream 97898 57581812 ~ 57584090 (+)
G525799 NA non-coding upstream 249436 57429603 ~ 57432552 (+)
G525903 NA non-coding downstream 12436 57694632 ~ 57694840 (+)
G525905 NA non-coding downstream 13072 57695268 ~ 57695488 (+)
G525908 NA non-coding downstream 16254 57698450 ~ 57698764 (+)
G525969 NA non-coding downstream 128544 57810740 ~ 57810945 (+)
G526375 NA non-coding downstream 148345 57830541 ~ 57830787 (+)
G525861 LOC106587122 other upstream 75621 57604108 ~ 57606367 (+)
G525645 NA other upstream 100918 57576084 ~ 57581070 (+)
LOC110526175 LOC106587084 other upstream 1561254 56020625 ~ 56120747 (+)
G525912 NA other downstream 21262 57703458 ~ 57710340 (+)
G525972 NA other downstream 135628 57817824 ~ 57818280 (+)
G526547 NA other downstream 428710 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 589883 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 636724 58318920 ~ 58408967 (+)

Expression


Co-expression Network