G526375


Basic Information

Item Value
gene id G526375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57830541 ~ 57830787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596513
CTGCtgcggtcatcctcctcttcaaagggggagacactctatacccaaactgttacagacctatatttaccctaccctgcctttctaaggaaagccaagttaacaaacagatcaccgaccatttcgaatcccaccgtaccttctccgctatgcaatctggtttccgagctggtcatgggtgcacctcagccacgctcaaggtcctaaacgatatcataacctccatcgataaaagacaatactgtgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596513 True 247 lncRNA 0.48 1 57830541 57830787

Neighbor

gene id symbol gene type direction distance location
LOC110526218 LOC106587128 coding upstream 69601 57744132 ~ 57760940 (+)
LOC110526219 LOC106587128 coding upstream 95606 57729444 ~ 57734935 (+)
LOC110526217 hce2 coding upstream 114263 57713161 ~ 57716278 (+)
psmc3 psmc3 coding upstream 170612 57649932 ~ 57659929 (+)
aplnr2 LOC106586995 coding upstream 183488 57644667 ~ 57647053 (+)
LOC110526223 LOC106561972 coding downstream 12207 57842994 ~ 57863756 (+)
fgf3 LOC106587135 coding downstream 85558 57916345 ~ 57921070 (+)
LOC110526226 LOC106587136 coding downstream 97991 57928778 ~ 57936266 (+)
fgf19 LOC106586997 coding downstream 110453 57941240 ~ 57943684 (+)
LOC110526232 dhcr7 coding downstream 321053 58151840 ~ 58158582 (+)
G525969 NA non-coding upstream 19596 57810740 ~ 57810945 (+)
G525908 NA non-coding upstream 131777 57698450 ~ 57698764 (+)
G525905 NA non-coding upstream 135053 57695268 ~ 57695488 (+)
G525903 NA non-coding upstream 135701 57694632 ~ 57694840 (+)
G525897 NA non-coding upstream 148345 57681988 ~ 57682196 (+)
G526386 NA non-coding downstream 9724 57840511 ~ 57840853 (+)
G526395 NA non-coding downstream 20206 57850993 ~ 57851197 (+)
G526411 NA non-coding downstream 38713 57869500 ~ 57869702 (+)
G526415 NA non-coding downstream 41979 57872766 ~ 57873110 (+)
G526416 NA non-coding downstream 42381 57873168 ~ 57873368 (+)
G525972 NA other upstream 12261 57817824 ~ 57818280 (+)
G525912 NA other upstream 120201 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 188059 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 202922 57621795 ~ 57635241 (+)
G525861 LOC106587122 other upstream 224174 57604108 ~ 57606367 (+)
G526547 NA other downstream 280119 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 441292 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 488133 58318920 ~ 58408967 (+)
G527450 NA other downstream 947936 58778723 ~ 58779017 (+)
G528653 NA other downstream 1940921 59771708 ~ 59772084 (+)

Expression


Co-expression Network