G526395


Basic Information

Item Value
gene id G526395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57850993 ~ 57851197 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596533
GGGTGAGGGAGTCTGAGAGGATCCCTATGAGTAGTAGACCAGTACAGAGTGACCTGAACAGTTTCTTGGTGTTTATTACTATGGTCATTATTTGTACCACACGGATGGAAATGAAATCCCAGGAGATTGAattggtagtagcagcagtagagacGTTTTGGGGTGTCAGATATTTTAGTGCAGAAGAACTACATGGGGTTTTGAG

Function

NR:

description
chromosomal protein D1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596533 True 205 lncRNA 0.43 1 57850993 57851197

Neighbor

gene id symbol gene type direction distance location
LOC110526218 LOC106587128 coding upstream 90053 57744132 ~ 57760940 (+)
LOC110526219 LOC106587128 coding upstream 116058 57729444 ~ 57734935 (+)
LOC110526217 hce2 coding upstream 134715 57713161 ~ 57716278 (+)
psmc3 psmc3 coding upstream 191064 57649932 ~ 57659929 (+)
aplnr2 LOC106586995 coding upstream 203940 57644667 ~ 57647053 (+)
fgf3 LOC106587135 coding downstream 65148 57916345 ~ 57921070 (+)
LOC110526226 LOC106587136 coding downstream 77581 57928778 ~ 57936266 (+)
fgf19 LOC106586997 coding downstream 90043 57941240 ~ 57943684 (+)
LOC110526232 dhcr7 coding downstream 300643 58151840 ~ 58158582 (+)
LOC110526234 LOC106587141 coding downstream 367692 58218513 ~ 58228939 (+)
G526386 NA non-coding upstream 10140 57840511 ~ 57840853 (+)
G526375 NA non-coding upstream 20206 57830541 ~ 57830787 (+)
G525969 NA non-coding upstream 40048 57810740 ~ 57810945 (+)
G525908 NA non-coding upstream 152229 57698450 ~ 57698764 (+)
G525905 NA non-coding upstream 155505 57695268 ~ 57695488 (+)
G526411 NA non-coding downstream 18303 57869500 ~ 57869702 (+)
G526415 NA non-coding downstream 21569 57872766 ~ 57873110 (+)
G526416 NA non-coding downstream 21971 57873168 ~ 57873368 (+)
G526418 NA non-coding downstream 22919 57874116 ~ 57874980 (+)
G526447 NA non-coding downstream 92618 57943815 ~ 57945202 (+)
G525972 NA other upstream 32713 57817824 ~ 57818280 (+)
G525912 NA other upstream 140653 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 208511 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 223374 57621795 ~ 57635241 (+)
G525861 LOC106587122 other upstream 244626 57604108 ~ 57606367 (+)
G526547 NA other downstream 259709 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 420882 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 467723 58318920 ~ 58408967 (+)
G527450 NA other downstream 927526 58778723 ~ 58779017 (+)
G528653 NA other downstream 1920511 59771708 ~ 59772084 (+)

Expression


Co-expression Network