G526418


Basic Information

Item Value
gene id G526418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 57874116 ~ 57874980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596557
ccctttgccttgatgacagccttgcacactcttggcattctctcagccaaaatcatgaagtagtcacctggaatgcatttcaattaacaggtgtgccttgttaaaagttcagttgtggaatttctttccttcttgatgcatttgagccaatcagttgtattgtgacaaggtaggggtgatatacagaacatagtcctatttggtaaaagaccaagtccatattatggcaagaacagctaaaataaagcaaagagaaacaacagtccatcattactttaagacatgaaggtcagtcaatacagaacatttcaagaactttgaaagtgtctACAAGTCCagttgcaaaaaacatcaagtgctatgatgaaactggctctcatgaggaccgccacaggaaaggaagacccagagttacctctgctgcagaggatacgttcattagttaccagtctcagcaattgcagcccaaataaatgtttcacagagttaaagtaacagacacatctcaacatcaactgttcagaagagacaggccttcatggtcaaattgctgcaaagaaaccactactaaaggacaccaataagaagaagagacttgcttgggccaagaaacacaagcaatggacattagaccagtgtaaatctctcctttggtctgatgagtccaaatttaagatttttggttccaaccatcgCATGGTGGAGTATTTGTGAtgagcgatacgccatcccatctggtttgcgtttgtttttcaacatgacaatgacccaacatacctccaggctgtgtaagggctatttgaccaagaaggagagtgatggagtgctgcatcagatgacctggtgtccacaatcacccgacctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596557 True 865 lncRNA 0.42 1 57874116 57874980

Neighbor

gene id symbol gene type direction distance location
LOC110526223 LOC106561972 coding upstream 10360 57842994 ~ 57863756 (+)
LOC110526218 LOC106587128 coding upstream 113176 57744132 ~ 57760940 (+)
LOC110526219 LOC106587128 coding upstream 139181 57729444 ~ 57734935 (+)
LOC110526217 hce2 coding upstream 157838 57713161 ~ 57716278 (+)
psmc3 psmc3 coding upstream 214187 57649932 ~ 57659929 (+)
fgf3 LOC106587135 coding downstream 41365 57916345 ~ 57921070 (+)
LOC110526226 LOC106587136 coding downstream 53798 57928778 ~ 57936266 (+)
fgf19 LOC106586997 coding downstream 66260 57941240 ~ 57943684 (+)
LOC110526232 dhcr7 coding downstream 276860 58151840 ~ 58158582 (+)
LOC110526234 LOC106587141 coding downstream 343909 58218513 ~ 58228939 (+)
G526416 NA non-coding upstream 748 57873168 ~ 57873368 (+)
G526415 NA non-coding upstream 1006 57872766 ~ 57873110 (+)
G526411 NA non-coding upstream 4414 57869500 ~ 57869702 (+)
G526395 NA non-coding upstream 22919 57850993 ~ 57851197 (+)
G526386 NA non-coding upstream 33263 57840511 ~ 57840853 (+)
G526447 NA non-coding downstream 68835 57943815 ~ 57945202 (+)
G526462 NA non-coding downstream 76553 57951533 ~ 57951744 (+)
G526476 NA non-coding downstream 107263 57982243 ~ 57982469 (+)
G526491 NA non-coding downstream 131258 58006238 ~ 58006461 (+)
G526515 NA non-coding downstream 160315 58035295 ~ 58040467 (+)
G525972 NA other upstream 55836 57817824 ~ 57818280 (+)
G525912 NA other upstream 163776 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 231634 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 246497 57621795 ~ 57635241 (+)
G525861 LOC106587122 other upstream 267749 57604108 ~ 57606367 (+)
G526547 NA other downstream 235926 58110906 ~ 58112819 (+)
G526628 LOC106587143 other downstream 397099 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 443940 58318920 ~ 58408967 (+)
G527450 NA other downstream 903743 58778723 ~ 58779017 (+)
G528653 NA other downstream 1896728 59771708 ~ 59772084 (+)

Expression


Co-expression Network