G526547


Basic Information

Item Value
gene id G526547
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58110906 ~ 58112819 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596687
CAGGAAATGTACTTTAATGTTCTCTGCACAACACCATGACAAAATGTGGGAAATTGCTTTAAATTGCATTAaacctgcaacattttctctccgccAACAAGAGGAGTGTGAACAGTttttgtcatgaacagtgcttgtgccaaTATAAAGTGGGGaggggatgttccccaatgctggaaagGGGGCCTGAGTAAAAGAGTTTGGGAACCTCTGCTCTACCACACATCACCTAGGCCTATCCCTCCTGCTAGTGTTGGCATTCCAGGCAGCCAGGCTATGTTGACCTAATCTGTCCTCATCAAGCTGGGTAAACAGGAGTGTGTGGTGTTCATTAGTCTGCCGGACTCATTAACCACCTGCTTCTAATTATCGCTAATCATGCCTCGTCTTGGATGTCTCTGGCTCTGCCGTCACTGCAGTGGTGGGCTCTAGACAGAACATGGCTGACATGTTGGCAAAATTGATGGAAGCTTCAACCTTCTagaacagggatgggcaactttaatGGTGACAACTCGTGACAGCGAAGATAAACATTTgaagttttaaagttaatttcctgcccTTCTGCACATCTTGCTGtggggcgtagagaaaatgtttttgttttataactcatttcatgcaattctacaaaaTTTGCCATCGGGCAGAACTATTTttattacacattttgccaaCGGGTGGAGGAAAATGTTTGCCGTTTTTAATATTGATAACTGATGATCAACGGGCCCGTTTGGTCATTTGACCATGCTTACTACAAGTTTTAGATCGTCTTTCGGCCGGCTAACTTACCAATAAGAAAAAACATGTAATGGGCTAATTGTGTGActtctgatgcacaaccaaatatctaaattgtgtattgtattactctaactctcaacagtaagttgagaccctgagTTTCCCCCGAAAATAATTCAAATTGGTCCGCGTGCCTTCAAAAATGGGGGGCCGCCAGTTACCCATCCCTGTTCTAGAATCTAGAAATCACTACTCTGAAAAAACTCAAAGAGAAGCGTCCAGATAGCCCATCACAGGCTAGCTAGCCGACATCATATCTCAATGGTCTGTCATGTTGTCATGAAATGGGCTTTTAACCAGACATGTCCCTACCTTCTTATGTGGTTGTGGACAGGGTTTGTGGTAAGGCCTTTGCACGAGCCCAAACTCACCAAGAAGAAAAGCAAACAAATagtgggaagagaggaggaggtcaGAGCTTTGATGTCAGGTCCTCTGGAGGTTGGCTTGTTTGCCCTAGTCTGTTTCCAGTAAACATGATGCTTGAGTGTGTGGAGTGTcaacaccagtgtgtgtgtgtgtgtgtgtgtgtgtactctattAGCACAGAACCACAGAACAAACCCAGGGGGAAATGCCTAGAACGGTGCCATGCCTTGATCACCGTAGTTATCTTCCTGATTGCATTTTATTATGACGTTGGAAAACATGCCATTTTTTATTCTTCTCAAAAACACATGTTTCTCCCGCTGCCCTTCGGGTAGAATAACAGttctccattccattccattccgcAGTGTGAGCATGATTTCTCAGTCAAGACTTGCATGCCCCGGGGAGAGCTAATAACCCTTATCTGAAATGACCATCACCAGGATGCATCAGCAGGAAATCTTCATTCACGCTTATCGGCCGGAAGACCTGAGGGTCTCAGAAAACACACAACCTCGACACCTTCCAACTGATTGCAACAGTCAGGTAATTATGTAACGTCAAGATTAAATTGTTGCTATAGCTATTCGGGAGAGAATTGACccaatgcaacaacaacaaaaacacaaggGCAGGCCTTGTCTAAAAATTGGTTTCACACATTTGAGAGAATCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596687 True 1859 TUCP 0.44 2 58110906 58112819

Neighbor

gene id symbol gene type direction distance location
fgf19 LOC106586997 coding upstream 167222 57941240 ~ 57943684 (+)
LOC110526226 LOC106587136 coding upstream 174640 57928778 ~ 57936266 (+)
fgf3 LOC106587135 coding upstream 189836 57916345 ~ 57921070 (+)
LOC110526223 LOC106561972 coding upstream 247150 57842994 ~ 57863756 (+)
LOC110526218 LOC106587128 coding upstream 349966 57744132 ~ 57760940 (+)
LOC110526232 dhcr7 coding downstream 39021 58151840 ~ 58158582 (+)
LOC110526234 LOC106587141 coding downstream 106070 58218513 ~ 58228939 (+)
LOC110526233 LOC106587142 coding downstream 115588 58228407 ~ 58236139 (+)
LOC110526235 LOC106586999 coding downstream 123441 58236260 ~ 58243577 (+)
LOC110526238 LOC106587144 coding downstream 147684 58260503 ~ 58263649 (+)
G526544 NA non-coding upstream 4169 58106525 ~ 58106737 (+)
G526542 NA non-coding upstream 5582 58105073 ~ 58105324 (+)
G526538 NA non-coding upstream 9413 58101255 ~ 58101493 (+)
G526536 NA non-coding upstream 12730 58097930 ~ 58098176 (+)
G526512 NA non-coding upstream 27513 58081003 ~ 58083393 (+)
G526574 NA non-coding downstream 31803 58144622 ~ 58146334 (+)
G526581 NA non-coding downstream 46517 58159336 ~ 58159886 (+)
G526582 NA non-coding downstream 50926 58163745 ~ 58164057 (+)
G526589 NA non-coding downstream 67341 58180160 ~ 58180369 (+)
G526591 NA non-coding downstream 68767 58181586 ~ 58181789 (+)
G525972 NA other upstream 292626 57817824 ~ 57818280 (+)
G525912 NA other upstream 400566 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 468424 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 483287 57621795 ~ 57635241 (+)
G525861 LOC106587122 other upstream 504539 57604108 ~ 57606367 (+)
G526628 LOC106587143 other downstream 159260 58272079 ~ 58272836 (+)
LOC110526933 LOC106562045 other downstream 206101 58318920 ~ 58408967 (+)
G527450 NA other downstream 665904 58778723 ~ 58779017 (+)
G528653 NA other downstream 1658889 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3858917 61971487 ~ 61979527 (+)

Expression


Co-expression Network