G526582


Basic Information

Item Value
gene id G526582
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58163745 ~ 58164057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596729
ctccccagagtaacacggcgggttattgattctgggctccggagattcgaaagccctggaagtggccggtggatcgaggcggagatggtgaacctgttctgtgaggttggagacttgggtggccagggtctcaacggcatgtcgagcagcagacaattcctgctcgtgtctgcctagcatcgctccctggatcccgacggctgagtggagaagatccgaagtcgctgggtccattcttggtcggattcttctgttacggttcgtgaatgaggacccaaaagcgaattaacttaaacagagcttctttaattac

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596729 True 313 lncRNA 0.54 1 58163745 58164057

Neighbor

gene id symbol gene type direction distance location
LOC110526232 dhcr7 coding upstream 5163 58151840 ~ 58158582 (+)
fgf19 LOC106586997 coding upstream 220061 57941240 ~ 57943684 (+)
LOC110526226 LOC106587136 coding upstream 227479 57928778 ~ 57936266 (+)
fgf3 LOC106587135 coding upstream 242675 57916345 ~ 57921070 (+)
LOC110526223 LOC106561972 coding upstream 299989 57842994 ~ 57863756 (+)
LOC110526234 LOC106587141 coding downstream 54832 58218513 ~ 58228939 (+)
LOC110526233 LOC106587142 coding downstream 64350 58228407 ~ 58236139 (+)
LOC110526235 LOC106586999 coding downstream 72203 58236260 ~ 58243577 (+)
LOC110526238 LOC106587144 coding downstream 96446 58260503 ~ 58263649 (+)
LOC110526933 LOC106562045 coding downstream 180088 58318920 ~ 58408967 (+)
G526581 NA non-coding upstream 3859 58159336 ~ 58159886 (+)
G526574 NA non-coding upstream 17411 58144622 ~ 58146334 (+)
G526544 NA non-coding upstream 57008 58106525 ~ 58106737 (+)
G526542 NA non-coding upstream 58421 58105073 ~ 58105324 (+)
G526538 NA non-coding upstream 62252 58101255 ~ 58101493 (+)
G526589 NA non-coding downstream 16103 58180160 ~ 58180369 (+)
G526591 NA non-coding downstream 17529 58181586 ~ 58181789 (+)
G526506 LOC106587140 non-coding downstream 30082 58194139 ~ 58200097 (+)
G526603 NA non-coding downstream 42664 58206721 ~ 58207112 (+)
G526604 NA non-coding downstream 43309 58207366 ~ 58207600 (+)
G526547 NA other upstream 50926 58110906 ~ 58112819 (+)
G525972 NA other upstream 345465 57817824 ~ 57818280 (+)
G525912 NA other upstream 453405 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 521263 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 536126 57621795 ~ 57635241 (+)
G526628 LOC106587143 other downstream 108022 58272079 ~ 58272836 (+)
G527450 NA other downstream 614666 58778723 ~ 58779017 (+)
G528653 NA other downstream 1607651 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3807679 61971487 ~ 61979527 (+)

Expression


Co-expression Network