G526607



Basic Information


Item Value
gene id G526607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58210003 ~ 58210304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU596754
TTGCAAGTTCCCATTGCCGATGGTCCACGGCTCATCAGAGTCAAAGTGAGTATCACCACCCATACCAGGACCAGGGAAGTAGGCGTGGGCCAGGAACCCGCCCTCGCCATCGAAGGGTGAGCTGTCTCCATGGAAACCCGAGGCAAAGAAGATCATGATGTCAGGCTCCTTCCTGCGGCCATATTTGATCTCCTGGTAGGGGATCTCATCGAAGGTCAGCGGGGTCACCTTCTGCCACACCTTGAAGGCCCTACGGATGGCCTCATACGAGTTGTACTCCCCGATCTTTGGTGTGTAGTTCT

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU596754 True 302 lncRNA 0.56 1 58210003 58210304

Neighbor


gene id symbol gene type direction distance location
LOC110526232 dhcr7 coding upstream 51421 58151840 ~ 58158582 (+)
fgf19 LOC106586997 coding upstream 266319 57941240 ~ 57943684 (+)
LOC110526226 LOC106587136 coding upstream 273737 57928778 ~ 57936266 (+)
fgf3 LOC106587135 coding upstream 288933 57916345 ~ 57921070 (+)
LOC110526223 LOC106561972 coding upstream 346247 57842994 ~ 57863756 (+)
LOC110526234 LOC106587141 coding downstream 8585 58218513 ~ 58228939 (+)
LOC110526233 LOC106587142 coding downstream 18103 58228407 ~ 58236139 (+)
LOC110526235 LOC106586999 coding downstream 25956 58236260 ~ 58243577 (+)
LOC110526238 LOC106587144 coding downstream 50199 58260503 ~ 58263649 (+)
LOC110526933 LOC106562045 coding downstream 133841 58318920 ~ 58408967 (+)
G526606 NA non-coding upstream 487 58209284 ~ 58209516 (+)
G526604 NA non-coding upstream 2403 58207366 ~ 58207600 (+)
G526603 NA non-coding upstream 2891 58206721 ~ 58207112 (+)
G526506 LOC106587140 non-coding upstream 9906 58194139 ~ 58200097 (+)
G526591 NA non-coding upstream 28214 58181586 ~ 58181789 (+)
G526608 NA non-coding downstream 219 58210523 ~ 58210804 (+)
G526609 NA non-coding downstream 816 58211120 ~ 58211334 (+)
G526511 NA non-coding downstream 38749 58249053 ~ 58256834 (+)
G526624 NA non-coding downstream 56964 58267268 ~ 58267483 (+)
G526547 NA other upstream 97184 58110906 ~ 58112819 (+)
G525972 NA other upstream 391723 57817824 ~ 57818280 (+)
G525912 NA other upstream 499663 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 567521 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 582384 57621795 ~ 57635241 (+)
G526628 LOC106587143 other downstream 61775 58272079 ~ 58272836 (+)
G527450 NA other downstream 568419 58778723 ~ 58779017 (+)
G528653 NA other downstream 1561404 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3761432 61971487 ~ 61979527 (+)

Expression



Co-expression Network