G526511


Basic Information

Item Value
gene id G526511
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58249053 ~ 58256834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596651
acatgtctcatatacagaacagaaagtaggttgattctagaagatcgggtcttcgggttggttcaggctgaggtgtagtcttcttggattggccctgttgggccgtccgtcatccctctgagtcttgttctttgtcacacaatgttcagctaaaaaggagattaggtgtgtgcgctggtttctgcaagtcaaggctgtctcttcctcccaatgtgtgggtgtatgtcttatctgtgtgtcctcggcagttagtgtgtgtaatgtgtgtgtgctgtgtgtgtgggtgtgggagctatcctgtatgggacctaacatgttttactgtgaaaatacgttgtctcagttatagcaatgtaatagcagtaggctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596651 True 371 lncRNA 0.47 2 58249053 58256834

Neighbor

gene id symbol gene type direction distance location
LOC110526235 LOC106586999 coding upstream 5476 58236260 ~ 58243577 (+)
LOC110526233 LOC106587142 coding upstream 12914 58228407 ~ 58236139 (+)
LOC110526234 LOC106587141 coding upstream 20114 58218513 ~ 58228939 (+)
LOC110526232 dhcr7 coding upstream 90471 58151840 ~ 58158582 (+)
fgf19 LOC106586997 coding upstream 305369 57941240 ~ 57943684 (+)
LOC110526238 LOC106587144 coding downstream 3669 58260503 ~ 58263649 (+)
LOC110526933 LOC106562045 coding downstream 87311 58318920 ~ 58408967 (+)
LOC110526241 LOC106587148 coding downstream 197614 58454448 ~ 58505295 (+)
LOC110526245 LOC106587150 coding downstream 383820 58640654 ~ 58732690 (+)
LOC110526935 LOC106562040 coding downstream 557649 58814483 ~ 59000538 (+)
G526609 NA non-coding upstream 37719 58211120 ~ 58211334 (+)
G526608 NA non-coding upstream 38249 58210523 ~ 58210804 (+)
G526607 NA non-coding upstream 38749 58210003 ~ 58210304 (+)
G526606 NA non-coding upstream 39537 58209284 ~ 58209516 (+)
G526624 NA non-coding downstream 10434 58267268 ~ 58267483 (+)
G526625 NA non-coding downstream 10834 58267668 ~ 58267950 (+)
G526627 NA non-coding downstream 13795 58270629 ~ 58271477 (+)
G526639 NA non-coding downstream 28542 58285376 ~ 58285687 (+)
G526640 LOC106587145 non-coding downstream 29098 58285932 ~ 58287403 (+)
G526547 NA other upstream 136234 58110906 ~ 58112819 (+)
G525972 NA other upstream 430773 57817824 ~ 57818280 (+)
G525912 NA other upstream 538713 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 606571 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 621434 57621795 ~ 57635241 (+)
G526628 LOC106587143 other downstream 15245 58272079 ~ 58272836 (+)
G527450 NA other downstream 521889 58778723 ~ 58779017 (+)
G528653 NA other downstream 1514874 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3714902 61971487 ~ 61979527 (+)

Expression


Co-expression Network