Gene
RNA
| Item | Value |
|---|---|
| gene id | G526627 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 58270629 ~ 58271477 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Y+L amino acid transporter 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU596782 | True | 460 | lncRNA | 0.49 | 2 | 58270629 | 58271477 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526238 | LOC106587144 | coding | upstream | 6980 | 58260503 ~ 58263649 (+) |
| LOC110526235 | LOC106586999 | coding | upstream | 27052 | 58236260 ~ 58243577 (+) |
| LOC110526233 | LOC106587142 | coding | upstream | 34490 | 58228407 ~ 58236139 (+) |
| LOC110526234 | LOC106587141 | coding | upstream | 41690 | 58218513 ~ 58228939 (+) |
| LOC110526232 | dhcr7 | coding | upstream | 112047 | 58151840 ~ 58158582 (+) |
| LOC110526933 | LOC106562045 | coding | downstream | 72668 | 58318920 ~ 58408967 (+) |
| LOC110526241 | LOC106587148 | coding | downstream | 182971 | 58454448 ~ 58505295 (+) |
| LOC110526245 | LOC106587150 | coding | downstream | 369177 | 58640654 ~ 58732690 (+) |
| LOC110526935 | LOC106562040 | coding | downstream | 543006 | 58814483 ~ 59000538 (+) |
| tshz3b | tshz3 | coding | downstream | 1071642 | 59343119 ~ 59376681 (+) |
| G526625 | NA | non-coding | upstream | 2679 | 58267668 ~ 58267950 (+) |
| G526624 | NA | non-coding | upstream | 3146 | 58267268 ~ 58267483 (+) |
| G526511 | NA | non-coding | upstream | 13795 | 58249053 ~ 58256834 (+) |
| G526609 | NA | non-coding | upstream | 59295 | 58211120 ~ 58211334 (+) |
| G526639 | NA | non-coding | downstream | 13899 | 58285376 ~ 58285687 (+) |
| G526640 | LOC106587145 | non-coding | downstream | 14455 | 58285932 ~ 58287403 (+) |
| G526641 | NA | non-coding | downstream | 20757 | 58292234 ~ 58292573 (+) |
| G526648 | NA | non-coding | downstream | 33019 | 58304496 ~ 58304738 (+) |
| G526649 | NA | non-coding | downstream | 33803 | 58305280 ~ 58305599 (+) |
| G526547 | NA | other | upstream | 157810 | 58110906 ~ 58112819 (+) |
| G525972 | NA | other | upstream | 452349 | 57817824 ~ 57818280 (+) |
| G525912 | NA | other | upstream | 560289 | 57703458 ~ 57710340 (+) |
| LOC110526214 | LOC106587124 | other | upstream | 628147 | 57639437 ~ 57642487 (+) |
| fbxo3 | fbxo3 | other | upstream | 643010 | 57621795 ~ 57635241 (+) |
| G526628 | LOC106587143 | other | downstream | 602 | 58272079 ~ 58272836 (+) |
| G527450 | NA | other | downstream | 507246 | 58778723 ~ 58779017 (+) |
| G528653 | NA | other | downstream | 1500231 | 59771708 ~ 59772084 (+) |
| LOC110526282 | LOC106561985 | other | downstream | 3700259 | 61971487 ~ 61979527 (+) |
