G526628 (LOC106587143)


Basic Information

Item Value
gene id G526628
gene name LOC106587143
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58272079 ~ 58272836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU596784
GAAAACCTGAAGAGCAAGTCCTACTAAGAGCAATTTGAGAGCGTTCTAAGTTACTCAACTGGAATTAAACGGTCTGCTAATGTCCTATTTGCATTTTCAGAGTGTCCTTTGATCCTTCGTTTGCCATTCGTGAGAGAAGGATAAAGTGAAGCAGAGAGTGCCTAAGCGCGTCATAAGGGTTTACTCACATATGCAGGCGGCTGCGATGAGGCGCGAAGCTGAGTAGGGTGGCTCACACGTGGGGAAGAGCGGCTGCACCAGGTAGTTAGCGAACGTTATGGCGATGACTGCCTGACTGGTGGGCTCAATGATGAGCAGTGATGTCCACAGGCGAATAAAGGCAATGAATGGACCAAAGGATTCCAGGATATAGGCATAGCTGGCCCCGGACTTGGTGATGGTGGTGCCCAGCTCTGCGTAACACAGAGCGCCGACCACTGAGAATATTCCACCGACGGCCCAGATGACCAGCGACAGGCCGTAGGAGGCGCTGTAGATGAGCACGCCCTTGGGAGACACGAAGATGCCCGAGCCAATCATGTTGCCTACGATGAGGCTGACTCCGTTGAGCAGGGAGATCTCCTTCTTCATCTGCATGCTTTCTTTAGCCTGCTCGGGGGCCACGGCGTCTGTGTCGACGGGGTGCGAGGAGCTCTCGTTCAGCTTCCTGGACTCGTCCCGGTTCTCCATGCTGGGACTGTCTGGGGGCCTGGCTACTTCTGGGAAGAGGGTCCCTCTGATTGGGTGCCACCTGCCTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU596784 True 758 TUCP 0.55 1 58272079 58272836

Neighbor

gene id symbol gene type direction distance location
LOC110526238 LOC106587144 coding upstream 8430 58260503 ~ 58263649 (+)
LOC110526235 LOC106586999 coding upstream 28502 58236260 ~ 58243577 (+)
LOC110526233 LOC106587142 coding upstream 35940 58228407 ~ 58236139 (+)
LOC110526234 LOC106587141 coding upstream 43140 58218513 ~ 58228939 (+)
LOC110526232 dhcr7 coding upstream 113497 58151840 ~ 58158582 (+)
LOC110526933 LOC106562045 coding downstream 71309 58318920 ~ 58408967 (+)
LOC110526241 LOC106587148 coding downstream 181612 58454448 ~ 58505295 (+)
LOC110526245 LOC106587150 coding downstream 367818 58640654 ~ 58732690 (+)
LOC110526935 LOC106562040 coding downstream 541647 58814483 ~ 59000538 (+)
tshz3b tshz3 coding downstream 1070283 59343119 ~ 59376681 (+)
G526627 NA non-coding upstream 602 58270629 ~ 58271477 (+)
G526625 NA non-coding upstream 4129 58267668 ~ 58267950 (+)
G526624 NA non-coding upstream 4596 58267268 ~ 58267483 (+)
G526511 NA non-coding upstream 15245 58249053 ~ 58256834 (+)
G526639 NA non-coding downstream 12540 58285376 ~ 58285687 (+)
G526640 LOC106587145 non-coding downstream 13096 58285932 ~ 58287403 (+)
G526641 NA non-coding downstream 19398 58292234 ~ 58292573 (+)
G526648 NA non-coding downstream 31660 58304496 ~ 58304738 (+)
G526649 NA non-coding downstream 32444 58305280 ~ 58305599 (+)
G526547 NA other upstream 159260 58110906 ~ 58112819 (+)
G525972 NA other upstream 453799 57817824 ~ 57818280 (+)
G525912 NA other upstream 561739 57703458 ~ 57710340 (+)
LOC110526214 LOC106587124 other upstream 629597 57639437 ~ 57642487 (+)
fbxo3 fbxo3 other upstream 644460 57621795 ~ 57635241 (+)
G527450 NA other downstream 505887 58778723 ~ 58779017 (+)
G528653 NA other downstream 1498872 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3698900 61971487 ~ 61979527 (+)
G531406 NA other downstream 3876937 62149773 ~ 62152218 (+)

Expression


Co-expression Network