G527105


Basic Information

Item Value
gene id G527105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 58511938 ~ 58512177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU597285
CAACGTGGCCTGGTGGAGATGAAGAAAGAGTTATACATGTGATTACTGACTATCTCCCCATTTTGCAATTGAACCCactctctctgcatccctctcgTTCGTTGCTTACATTGTTGGTGGAGGGTAGAGCCATTCTAAACTTTAGCAAATTGTTTTTCTGATGTGATGTCACTGAGACTTTGATGCTGTCTACGACCACTTTCTGAGATCCCTGCTTGGTAATGCTGTGAAATGTGCTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU597285 True 240 lncRNA 0.44 1 58511938 58512177

Neighbor

gene id symbol gene type direction distance location
LOC110526241 LOC106587148 coding upstream 6643 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 102971 58318920 ~ 58408967 (+)
LOC110526238 LOC106587144 coding upstream 248289 58260503 ~ 58263649 (+)
LOC110526235 LOC106586999 coding upstream 268361 58236260 ~ 58243577 (+)
LOC110526233 LOC106587142 coding upstream 275799 58228407 ~ 58236139 (+)
LOC110526245 LOC106587150 coding downstream 128477 58640654 ~ 58732690 (+)
LOC110526935 LOC106562040 coding downstream 302306 58814483 ~ 59000538 (+)
tshz3b tshz3 coding downstream 830942 59343119 ~ 59376681 (+)
LOC118965037 NA coding downstream 1331451 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 1338985 59851162 ~ 59861646 (+)
G527104 NA non-coding upstream 178 58511538 ~ 58511760 (+)
G527076 NA non-coding upstream 1306 58510208 ~ 58510632 (+)
G527075 NA non-coding upstream 1923 58509673 ~ 58510015 (+)
G527028 NA non-coding upstream 75115 58436619 ~ 58436823 (+)
G527020 NA non-coding upstream 79758 58431902 ~ 58432180 (+)
G527113 NA non-coding downstream 15944 58528121 ~ 58581884 (+)
G527157 NA non-coding downstream 85635 58597812 ~ 58600119 (+)
G527393 NA non-coding downstream 228323 58740500 ~ 58740805 (+)
G527444 NA non-coding downstream 261175 58773352 ~ 58773630 (+)
G527446 LOC105416325 non-coding downstream 263081 58775258 ~ 58775494 (+)
G526628 LOC106587143 other upstream 239102 58272079 ~ 58272836 (+)
G526547 NA other upstream 399119 58110906 ~ 58112819 (+)
G525972 NA other upstream 693658 57817824 ~ 57818280 (+)
G525912 NA other upstream 801598 57703458 ~ 57710340 (+)
G527450 NA other downstream 266546 58778723 ~ 58779017 (+)
G528653 NA other downstream 1259531 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 3459559 61971487 ~ 61979527 (+)
G531406 NA other downstream 3637596 62149773 ~ 62152218 (+)
G532259 NA other downstream 4308243 62820420 ~ 62822616 (+)

Expression


Co-expression Network