Item | Value |
---|---|
gene id | G527446 |
gene name | LOC105416325 |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048570.1 |
NCBI id | CM023224.2 |
chromosome length | 101096859 |
location | 58775258 ~ 58775494 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU597649 | True | 237 | lncRNA | 0.46 | 1 | 58775258 | 58775494 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110526245 | LOC106587150 | coding | upstream | 42568 | 58640654 ~ 58732690 (+) |
LOC110526241 | LOC106587148 | coding | upstream | 269963 | 58454448 ~ 58505295 (+) |
LOC110526933 | LOC106562045 | coding | upstream | 366291 | 58318920 ~ 58408967 (+) |
LOC110526238 | LOC106587144 | coding | upstream | 511609 | 58260503 ~ 58263649 (+) |
LOC110526235 | LOC106586999 | coding | upstream | 531681 | 58236260 ~ 58243577 (+) |
LOC110526935 | LOC106562040 | coding | downstream | 38989 | 58814483 ~ 59000538 (+) |
tshz3b | tshz3 | coding | downstream | 567625 | 59343119 ~ 59376681 (+) |
LOC118965037 | NA | coding | downstream | 1068134 | 59843628 ~ 59847586 (+) |
LOC110526256 | LOC106562011 | coding | downstream | 1075668 | 59851162 ~ 59861646 (+) |
LOC110526261 | LOC106562006 | coding | downstream | 1392011 | 60167505 ~ 60175549 (+) |
G527444 | NA | non-coding | upstream | 1628 | 58773352 ~ 58773630 (+) |
G527393 | NA | non-coding | upstream | 34453 | 58740500 ~ 58740805 (+) |
G527157 | NA | non-coding | upstream | 175139 | 58597812 ~ 58600119 (+) |
G527113 | NA | non-coding | upstream | 193374 | 58528121 ~ 58581884 (+) |
G527105 | NA | non-coding | upstream | 263081 | 58511938 ~ 58512177 (+) |
G527447 | NA | non-coding | downstream | 1189 | 58776683 ~ 58777182 (+) |
G527451 | NA | non-coding | downstream | 3875 | 58779369 ~ 58779600 (+) |
G527452 | NA | non-coding | downstream | 5090 | 58780584 ~ 58783386 (+) |
G527550 | NA | non-coding | downstream | 121369 | 58896863 ~ 58904473 (+) |
G527589 | NA | non-coding | downstream | 207903 | 58983397 ~ 58984068 (+) |
G526628 | LOC106587143 | other | upstream | 502422 | 58272079 ~ 58272836 (+) |
G526547 | NA | other | upstream | 662439 | 58110906 ~ 58112819 (+) |
G525972 | NA | other | upstream | 956978 | 57817824 ~ 57818280 (+) |
G525912 | NA | other | upstream | 1064918 | 57703458 ~ 57710340 (+) |
G527450 | NA | other | downstream | 3229 | 58778723 ~ 58779017 (+) |
G528653 | NA | other | downstream | 996214 | 59771708 ~ 59772084 (+) |
LOC110526282 | LOC106561985 | other | downstream | 3196242 | 61971487 ~ 61979527 (+) |
G531406 | NA | other | downstream | 3374279 | 62149773 ~ 62152218 (+) |
G532259 | NA | other | downstream | 4044926 | 62820420 ~ 62822616 (+) |