Gene
RNA
| Item | Value |
|---|---|
| gene id | G527589 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 58983397 ~ 58984068 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU597797 | True | 487 | lncRNA | 0.40 | 2 | 58983397 | 58984068 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526245 | LOC106587150 | coding | upstream | 250707 | 58640654 ~ 58732690 (+) |
| LOC110526241 | LOC106587148 | coding | upstream | 478102 | 58454448 ~ 58505295 (+) |
| LOC110526933 | LOC106562045 | coding | upstream | 574430 | 58318920 ~ 58408967 (+) |
| LOC110526238 | LOC106587144 | coding | upstream | 719748 | 58260503 ~ 58263649 (+) |
| LOC110526235 | LOC106586999 | coding | upstream | 739820 | 58236260 ~ 58243577 (+) |
| tshz3b | tshz3 | coding | downstream | 359051 | 59343119 ~ 59376681 (+) |
| LOC118965037 | NA | coding | downstream | 859560 | 59843628 ~ 59847586 (+) |
| LOC110526256 | LOC106562011 | coding | downstream | 867094 | 59851162 ~ 59861646 (+) |
| LOC110526261 | LOC106562006 | coding | downstream | 1183437 | 60167505 ~ 60175549 (+) |
| LOC100653452 | LOC106587300 | coding | downstream | 1446133 | 60430201 ~ 60432307 (+) |
| G527550 | NA | non-coding | upstream | 78924 | 58896863 ~ 58904473 (+) |
| G527452 | NA | non-coding | upstream | 200011 | 58780584 ~ 58783386 (+) |
| G527451 | NA | non-coding | upstream | 203797 | 58779369 ~ 58779600 (+) |
| G527447 | NA | non-coding | upstream | 206215 | 58776683 ~ 58777182 (+) |
| G527446 | LOC105416325 | non-coding | upstream | 207903 | 58775258 ~ 58775494 (+) |
| G527594 | NA | non-coding | downstream | 11306 | 58995374 ~ 58995705 (+) |
| G527599 | NA | non-coding | downstream | 24184 | 59008252 ~ 59009305 (+) |
| G527885 | NA | non-coding | downstream | 163866 | 59147934 ~ 59148141 (+) |
| G527963 | NA | non-coding | downstream | 219344 | 59203412 ~ 59203664 (+) |
| G527992 | NA | non-coding | downstream | 254245 | 59238313 ~ 59241544 (+) |
| G527450 | NA | other | upstream | 204380 | 58778723 ~ 58779017 (+) |
| G526628 | LOC106587143 | other | upstream | 710561 | 58272079 ~ 58272836 (+) |
| G526547 | NA | other | upstream | 870578 | 58110906 ~ 58112819 (+) |
| G525972 | NA | other | upstream | 1165117 | 57817824 ~ 57818280 (+) |
| G528653 | NA | other | downstream | 787640 | 59771708 ~ 59772084 (+) |
| LOC110526282 | LOC106561985 | other | downstream | 2987668 | 61971487 ~ 61979527 (+) |
| G531406 | NA | other | downstream | 3165705 | 62149773 ~ 62152218 (+) |
| G532259 | NA | other | downstream | 3836352 | 62820420 ~ 62822616 (+) |
| LOC110526311 | LOC106587159 | other | downstream | 4028190 | 63005672 ~ 63068991 (+) |
