G527992


Basic Information

Item Value
gene id G527992
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59238313 ~ 59241544 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU598229
gtgtagattgcgatccatgttttaatgaacaaacgtaaaaacacgaatcaatgcaaacactacaaaataaagaacgtgatgaacgtaacgaaaacctaaaacagcctatctggtgaaaaacacatagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgacaaacacctgcctctgattgagaaccatatcaggccgaacatagaactagacaaactagacatgtaacatagaatgcccactcagatcacaccctgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU598229 True 298 lncRNA 0.40 2 59238313 59241544

Neighbor

gene id symbol gene type direction distance location
LOC110526935 LOC106562040 coding upstream 237775 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 505623 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 733018 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 829346 58318920 ~ 58408967 (+)
LOC110526238 LOC106587144 coding upstream 974664 58260503 ~ 58263649 (+)
tshz3b tshz3 coding downstream 101575 59343119 ~ 59376681 (+)
LOC118965037 NA coding downstream 602084 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 609618 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 925961 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 1188657 60430201 ~ 60432307 (+)
G527963 NA non-coding upstream 34649 59203412 ~ 59203664 (+)
G527885 NA non-coding upstream 90172 59147934 ~ 59148141 (+)
G527599 NA non-coding upstream 229008 59008252 ~ 59009305 (+)
G527594 NA non-coding upstream 242608 58995374 ~ 58995705 (+)
G527589 NA non-coding upstream 254245 58983397 ~ 58984068 (+)
G528215 NA non-coding downstream 169917 59411461 ~ 59411665 (+)
G528265 NA non-coding downstream 214933 59456477 ~ 59456973 (+)
G528274 NA non-coding downstream 219534 59461078 ~ 59461291 (+)
G528321 NA non-coding downstream 286814 59528358 ~ 59530867 (+)
G528337 NA non-coding downstream 309460 59551004 ~ 59553757 (+)
G527450 NA other upstream 459296 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 965477 58272079 ~ 58272836 (+)
G526547 NA other upstream 1125494 58110906 ~ 58112819 (+)
G525972 NA other upstream 1420033 57817824 ~ 57818280 (+)
G528653 NA other downstream 530164 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 2730192 61971487 ~ 61979527 (+)
G531406 NA other downstream 2908229 62149773 ~ 62152218 (+)
G532259 NA other downstream 3578876 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3770714 63005672 ~ 63068991 (+)

Expression


Co-expression Network