G528215


Basic Information

Item Value
gene id G528215
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59411461 ~ 59411665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU598466
TATTTGCACTCATTACTACTcgtttcaattacattttcagcCAACTTACAAGCAAATACTTTATGGATTTATTGTTACAAATCAACTTGCAATGTTTCTAGCCTACTacttgcctgctaacattagcccTACCAGCCTGCTAATGTTACATTAGCATTACATGAGTCAGCCAGTTGCTATCAACACCTAgcttacagctacatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU598466 True 205 lncRNA 0.37 1 59411461 59411665

Neighbor

gene id symbol gene type direction distance location
tshz3b tshz3 coding upstream 34780 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 410923 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 678771 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 906166 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 1002494 58318920 ~ 58408967 (+)
LOC118965037 NA coding downstream 431963 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 439497 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 755840 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 1018536 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 1036941 60448606 ~ 60452270 (+)
G527992 NA non-coding upstream 169917 59238313 ~ 59241544 (+)
G527963 NA non-coding upstream 207797 59203412 ~ 59203664 (+)
G527885 NA non-coding upstream 263320 59147934 ~ 59148141 (+)
G527599 NA non-coding upstream 402156 59008252 ~ 59009305 (+)
G527594 NA non-coding upstream 415756 58995374 ~ 58995705 (+)
G528265 NA non-coding downstream 44812 59456477 ~ 59456973 (+)
G528274 NA non-coding downstream 49413 59461078 ~ 59461291 (+)
G528321 NA non-coding downstream 116693 59528358 ~ 59530867 (+)
G528337 NA non-coding downstream 139339 59551004 ~ 59553757 (+)
G528644 NA non-coding downstream 355497 59767162 ~ 59767517 (+)
G527450 NA other upstream 632444 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 1138625 58272079 ~ 58272836 (+)
G526547 NA other upstream 1298642 58110906 ~ 58112819 (+)
G525972 NA other upstream 1593181 57817824 ~ 57818280 (+)
G528653 NA other downstream 360043 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 2560071 61971487 ~ 61979527 (+)
G531406 NA other downstream 2738108 62149773 ~ 62152218 (+)
G532259 NA other downstream 3408755 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3600593 63005672 ~ 63068991 (+)

Expression


Co-expression Network