G528337


Basic Information

Item Value
gene id G528337
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59551004 ~ 59553757 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU598589
GTCTCATCATCATCATGgtcattaccatcatcatcagCATCATGTAAATTTTTGTCAAACCGTCTGATGAAACAATGATGATGGCATCAAGCTAACAGTCTGGAACATAGAATTTACTTCTAAAACTTCAGGTGTACCGCGCTACACTTTTCTTATTTAAataagagagcgagagcgagagagagagagagagacagagagagaaagagagagagagagagagacagagagacagagagagagagagagagagagagagacagagagagagagagagatagagagagagagagagagagagacagagagagagagagagagagagagagagagagagagagagagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU598589 True 347 lncRNA 0.43 2 59551004 59553757

Neighbor

gene id symbol gene type direction distance location
tshz3b tshz3 coding upstream 174323 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 550466 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 818314 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 1045709 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 1142037 58318920 ~ 58408967 (+)
LOC118965037 NA coding downstream 289871 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 297405 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 613748 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 876444 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 894849 60448606 ~ 60452270 (+)
G528321 NA non-coding upstream 20137 59528358 ~ 59530867 (+)
G528274 NA non-coding upstream 89713 59461078 ~ 59461291 (+)
G528265 NA non-coding upstream 94031 59456477 ~ 59456973 (+)
G528215 NA non-coding upstream 139339 59411461 ~ 59411665 (+)
G527992 NA non-coding upstream 309460 59238313 ~ 59241544 (+)
G528644 NA non-coding downstream 213405 59767162 ~ 59767517 (+)
G528663 NA non-coding downstream 224498 59778255 ~ 59778497 (+)
G528665 NA non-coding downstream 225472 59779229 ~ 59779452 (+)
G528673 NA non-coding downstream 231592 59785349 ~ 59785558 (+)
G528705 NA non-coding downstream 252181 59805938 ~ 59806738 (+)
G527450 NA other upstream 771987 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 1278168 58272079 ~ 58272836 (+)
G526547 NA other upstream 1438185 58110906 ~ 58112819 (+)
G525972 NA other upstream 1732724 57817824 ~ 57818280 (+)
G528653 NA other downstream 217951 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 2417979 61971487 ~ 61979527 (+)
G531406 NA other downstream 2596016 62149773 ~ 62152218 (+)
G532259 NA other downstream 3266663 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3458501 63005672 ~ 63068991 (+)

Expression


Co-expression Network