G528644


Basic Information

Item Value
gene id G528644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59767162 ~ 59767517 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU598903
gctgtgtaagggctatttgaacaagaaggaaagtgatggagtgctgcatcagatgacctggcctccaaaatcacctgatctcaacccaattgagatggtttgggatgagttggaccacagagtgaaggaaaagcaaccaacaagtgctcagcatatgtgggaactccttcaagactgttggaaaagcattcttcatgaagctagttgagagaatgccaagagtgtgcaaagctgttatcaaggcaaagggtggctactttgaagaaatatattttgatttgtttaacacgcttttggttactacatgattccatatgttatttcatagttttgatgtcttcactgttattctacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU598903 True 356 lncRNA 0.41 1 59767162 59767517

Neighbor

gene id symbol gene type direction distance location
tshz3b tshz3 coding upstream 390481 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 766624 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 1034472 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 1261867 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 1358195 58318920 ~ 58408967 (+)
LOC118965037 NA coding downstream 76111 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 83645 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 399988 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 662684 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 681089 60448606 ~ 60452270 (+)
G528337 NA non-coding upstream 213405 59551004 ~ 59553757 (+)
G528321 NA non-coding upstream 236295 59528358 ~ 59530867 (+)
G528274 NA non-coding upstream 305871 59461078 ~ 59461291 (+)
G528265 NA non-coding upstream 310189 59456477 ~ 59456973 (+)
G528215 NA non-coding upstream 355497 59411461 ~ 59411665 (+)
G528663 NA non-coding downstream 10738 59778255 ~ 59778497 (+)
G528665 NA non-coding downstream 11712 59779229 ~ 59779452 (+)
G528673 NA non-coding downstream 17832 59785349 ~ 59785558 (+)
G528705 NA non-coding downstream 38421 59805938 ~ 59806738 (+)
G528728 ccne1 non-coding downstream 75063 59842580 ~ 59844196 (+)
G527450 NA other upstream 988145 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 1494326 58272079 ~ 58272836 (+)
G526547 NA other upstream 1654343 58110906 ~ 58112819 (+)
G525972 NA other upstream 1948882 57817824 ~ 57818280 (+)
G528653 NA other downstream 4191 59771708 ~ 59772084 (+)
LOC110526282 LOC106561985 other downstream 2204219 61971487 ~ 61979527 (+)
G531406 NA other downstream 2382256 62149773 ~ 62152218 (+)
G532259 NA other downstream 3052903 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3244741 63005672 ~ 63068991 (+)

Expression


Co-expression Network