G528663



Basic Information


Item Value
gene id G528663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59778255 ~ 59778497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU598922
GCTACACTGGaagtcattaaaacacacacacacaaaaaaaaacacacacacacacacacacacacacacaggtaaataGGATGTTACACAGTAGCAGACTAgcacacaaatacatttaaaagagTAGGCTACAAATGCTGTACATAGGGTGCAAGAAAGAAATCTGTAAACAGTAGCTAACCCAATGCTGGCAGAATTATACGCACAATTGCATTTAATAATCAACTCAAAGCACCTACATAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU598922 True 243 lncRNA 0.38 1 59778255 59778497
Loading

Neighbor


gene id symbol gene type direction distance location
tshz3b tshz3 coding upstream 401574 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 777717 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 1045565 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 1272960 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 1369288 58318920 ~ 58408967 (+)
LOC118965037 NA coding downstream 65131 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 72665 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 389008 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 651704 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 670109 60448606 ~ 60452270 (+)
G528644 NA non-coding upstream 10738 59767162 ~ 59767517 (+)
G528337 NA non-coding upstream 224498 59551004 ~ 59553757 (+)
G528321 NA non-coding upstream 247388 59528358 ~ 59530867 (+)
G528274 NA non-coding upstream 316964 59461078 ~ 59461291 (+)
G528265 NA non-coding upstream 321282 59456477 ~ 59456973 (+)
G528665 NA non-coding downstream 732 59779229 ~ 59779452 (+)
G528673 NA non-coding downstream 6852 59785349 ~ 59785558 (+)
G528705 NA non-coding downstream 27441 59805938 ~ 59806738 (+)
G528728 ccne1 non-coding downstream 64083 59842580 ~ 59844196 (+)
G528802 NA non-coding downstream 118296 59896793 ~ 59900613 (+)
G528653 NA other upstream 6171 59771708 ~ 59772084 (+)
G527450 NA other upstream 999238 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 1505419 58272079 ~ 58272836 (+)
G526547 NA other upstream 1665436 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 2193239 61971487 ~ 61979527 (+)
G531406 NA other downstream 2371276 62149773 ~ 62152218 (+)
G532259 NA other downstream 3041923 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3233761 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 3254434 63032931 ~ 63198734 (+)

Expression


G528663 Expression in all Baseline Samples

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G528663 Expression in each Bioproject

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G528663 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 14.
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Co-expression Network