G528665



Basic Information


Item Value
gene id G528665
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59779229 ~ 59779452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU598924
agagagagagagagacagagagagagagagagagagacagagagagagagaaagagagagagagagagagagagagagacagagagagagagagagacagagagacagagagagagagagagagagagagagagagagacagagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU598924 True 224 lncRNA 0.50 1 59779229 59779452
Loading

Neighbor


gene id symbol gene type direction distance location
tshz3b tshz3 coding upstream 402548 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 778691 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 1046539 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 1273934 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 1370262 58318920 ~ 58408967 (+)
LOC118965037 NA coding downstream 64176 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 71710 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 388053 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 650749 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 669154 60448606 ~ 60452270 (+)
G528663 NA non-coding upstream 732 59778255 ~ 59778497 (+)
G528644 NA non-coding upstream 11712 59767162 ~ 59767517 (+)
G528337 NA non-coding upstream 225472 59551004 ~ 59553757 (+)
G528321 NA non-coding upstream 248362 59528358 ~ 59530867 (+)
G528274 NA non-coding upstream 317938 59461078 ~ 59461291 (+)
G528673 NA non-coding downstream 5897 59785349 ~ 59785558 (+)
G528705 NA non-coding downstream 26486 59805938 ~ 59806738 (+)
G528728 ccne1 non-coding downstream 63128 59842580 ~ 59844196 (+)
G528802 NA non-coding downstream 117341 59896793 ~ 59900613 (+)
G528986 NA non-coding downstream 254620 60034072 ~ 60034297 (+)
G528653 NA other upstream 7145 59771708 ~ 59772084 (+)
G527450 NA other upstream 1000212 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 1506393 58272079 ~ 58272836 (+)
G526547 NA other upstream 1666410 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 2192284 61971487 ~ 61979527 (+)
G531406 NA other downstream 2370321 62149773 ~ 62152218 (+)
G532259 NA other downstream 3040968 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3232806 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 3253479 63032931 ~ 63198734 (+)

Expression


G528665 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G528665 Expression in each Bioproject

Bar chart with 19 bars.
G528665 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network