G528673


Basic Information

Item Value
gene id G528673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59785349 ~ 59785558 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU598932
gaaacatgcatgagagcatcagctgttccggacgactgtgtgatcacgctctccacagccgatgtgagtaagaccattaaacaggtcaacattcacaaggccgcagggtcagacggattaccaggacgtgtactccgagcatgcgctgaccaactggcaagtgtcttcactgacattttcaacctctccctgtctgagtctgcaatacca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU598932 True 210 lncRNA 0.51 1 59785349 59785558

Neighbor

gene id symbol gene type direction distance location
tshz3b tshz3 coding upstream 408668 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 784811 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 1052659 58640654 ~ 58732690 (+)
LOC110526241 LOC106587148 coding upstream 1280054 58454448 ~ 58505295 (+)
LOC110526933 LOC106562045 coding upstream 1376382 58318920 ~ 58408967 (+)
LOC118965037 NA coding downstream 58070 59843628 ~ 59847586 (+)
LOC110526256 LOC106562011 coding downstream 65604 59851162 ~ 59861646 (+)
LOC110526261 LOC106562006 coding downstream 381947 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 644643 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 663048 60448606 ~ 60452270 (+)
G528665 NA non-coding upstream 5897 59779229 ~ 59779452 (+)
G528663 NA non-coding upstream 6852 59778255 ~ 59778497 (+)
G528644 NA non-coding upstream 17832 59767162 ~ 59767517 (+)
G528337 NA non-coding upstream 231592 59551004 ~ 59553757 (+)
G528321 NA non-coding upstream 254482 59528358 ~ 59530867 (+)
G528705 NA non-coding downstream 20380 59805938 ~ 59806738 (+)
G528728 ccne1 non-coding downstream 57022 59842580 ~ 59844196 (+)
G528802 NA non-coding downstream 111235 59896793 ~ 59900613 (+)
G528986 NA non-coding downstream 248514 60034072 ~ 60034297 (+)
G529052 NA non-coding downstream 294611 60080169 ~ 60080372 (+)
G528653 NA other upstream 13265 59771708 ~ 59772084 (+)
G527450 NA other upstream 1006332 58778723 ~ 58779017 (+)
G526628 LOC106587143 other upstream 1512513 58272079 ~ 58272836 (+)
G526547 NA other upstream 1672530 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 2186178 61971487 ~ 61979527 (+)
G531406 NA other downstream 2364215 62149773 ~ 62152218 (+)
G532259 NA other downstream 3034862 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3226700 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 3247373 63032931 ~ 63198734 (+)

Expression


Co-expression Network