G528802


Basic Information

Item Value
gene id G528802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 59896793 ~ 59900613 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599069
gtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggggttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaaattcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagatgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcattctacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtagatgaacCAAATTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599069 True 576 lncRNA 0.39 2 59896793 59900613

Neighbor

gene id symbol gene type direction distance location
LOC110526256 LOC106562011 coding upstream 35147 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 49207 59843628 ~ 59847586 (+)
tshz3b tshz3 coding upstream 520112 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 896255 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 1164103 58640654 ~ 58732690 (+)
LOC110526261 LOC106562006 coding downstream 266892 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 529588 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 547993 60448606 ~ 60452270 (+)
LOC110526268 LOC106587295 coding downstream 607346 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 771095 60671708 ~ 60752783 (+)
G528728 ccne1 non-coding upstream 52597 59842580 ~ 59844196 (+)
G528705 NA non-coding upstream 90055 59805938 ~ 59806738 (+)
G528673 NA non-coding upstream 111235 59785349 ~ 59785558 (+)
G528665 NA non-coding upstream 117341 59779229 ~ 59779452 (+)
G528663 NA non-coding upstream 118296 59778255 ~ 59778497 (+)
G528986 NA non-coding downstream 133459 60034072 ~ 60034297 (+)
G529052 NA non-coding downstream 179556 60080169 ~ 60080372 (+)
G529500 NA non-coding downstream 505024 60405637 ~ 60405856 (+)
G529502 NA non-coding downstream 505609 60406222 ~ 60406430 (+)
G529504 NA non-coding downstream 506109 60406722 ~ 60407035 (+)
G528653 NA other upstream 124709 59771708 ~ 59772084 (+)
G527450 NA other upstream 1117776 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 1524825 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 1623957 58272079 ~ 58272836 (+)
G526547 NA other upstream 1783974 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 2071123 61971487 ~ 61979527 (+)
G531406 NA other downstream 2249160 62149773 ~ 62152218 (+)
G532259 NA other downstream 2919807 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 3111645 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 3132318 63032931 ~ 63198734 (+)

Expression


Co-expression Network