G528986


Basic Information

Item Value
gene id G528986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60034072 ~ 60034297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599258
cccccttcacagtagaagcctgaaacaaagttctaaagactgttgacatctagtggaagccttaggaagtgcaatcagACCAATTTTACACTGTATCTTGGATAGGCATATACTTGAAaatctacaaacctcagatttcccacttcctggttggattttttctcaggtttctgcctaccatatgagttctgttttactcacagacatcattcaaacagttttagaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599258 True 226 lncRNA 0.39 1 60034072 60034297

Neighbor

gene id symbol gene type direction distance location
LOC110526256 LOC106562011 coding upstream 172426 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 186486 59843628 ~ 59847586 (+)
tshz3b tshz3 coding upstream 657391 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 1033534 58814483 ~ 59000538 (+)
LOC110526245 LOC106587150 coding upstream 1301382 58640654 ~ 58732690 (+)
LOC110526261 LOC106562006 coding downstream 133208 60167505 ~ 60175549 (+)
LOC100653452 LOC106587300 coding downstream 395904 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 414309 60448606 ~ 60452270 (+)
LOC110526268 LOC106587295 coding downstream 473662 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 637411 60671708 ~ 60752783 (+)
G528802 NA non-coding upstream 133459 59896793 ~ 59900613 (+)
G528728 ccne1 non-coding upstream 189876 59842580 ~ 59844196 (+)
G528705 NA non-coding upstream 227334 59805938 ~ 59806738 (+)
G528673 NA non-coding upstream 248514 59785349 ~ 59785558 (+)
G528665 NA non-coding upstream 254620 59779229 ~ 59779452 (+)
G529052 NA non-coding downstream 45872 60080169 ~ 60080372 (+)
G529500 NA non-coding downstream 371340 60405637 ~ 60405856 (+)
G529502 NA non-coding downstream 371925 60406222 ~ 60406430 (+)
G529504 NA non-coding downstream 372425 60406722 ~ 60407035 (+)
G529506 NA non-coding downstream 373392 60407689 ~ 60408096 (+)
G528653 NA other upstream 261988 59771708 ~ 59772084 (+)
G527450 NA other upstream 1255055 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 1662104 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 1761236 58272079 ~ 58272836 (+)
G526547 NA other upstream 1921253 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 1937439 61971487 ~ 61979527 (+)
G531406 NA other downstream 2115476 62149773 ~ 62152218 (+)
G532259 NA other downstream 2786123 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2977961 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2998634 63032931 ~ 63198734 (+)

Expression


Co-expression Network