G529500


Basic Information

Item Value
gene id G529500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60405637 ~ 60405856 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599793
caaaacactatgaaatGATCGATCCCTAGGTTGTTAGTGGGTCCATTAAATGTGTATGTAAAAACATTAAATTTAACAAAACCATTTCACATCCAATTAGTCCATTCTCCCAGTCAAATGCTGACCTAAATATGGACTTTTGTCAGTCTGTACTCATCaccagatacatttttttttctccatcattGGGCAGATGCTTTCACTGACATAATGATTACCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599793 True 220 lncRNA 0.35 1 60405637 60405856

Neighbor

gene id symbol gene type direction distance location
LOC110526261 LOC106562006 coding upstream 230088 60167505 ~ 60175549 (+)
LOC110526256 LOC106562011 coding upstream 543991 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 558051 59843628 ~ 59847586 (+)
tshz3b tshz3 coding upstream 1028956 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 1405099 58814483 ~ 59000538 (+)
LOC100653452 LOC106587300 coding downstream 24345 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 42750 60448606 ~ 60452270 (+)
LOC110526268 LOC106587295 coding downstream 102103 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 265852 60671708 ~ 60752783 (+)
LOC110526274 LOC106561991 coding downstream 409727 60815583 ~ 60863460 (+)
G529052 NA non-coding upstream 325265 60080169 ~ 60080372 (+)
G528986 NA non-coding upstream 371340 60034072 ~ 60034297 (+)
G528802 NA non-coding upstream 505024 59896793 ~ 59900613 (+)
G528728 ccne1 non-coding upstream 561441 59842580 ~ 59844196 (+)
G528705 NA non-coding upstream 598899 59805938 ~ 59806738 (+)
G529502 NA non-coding downstream 366 60406222 ~ 60406430 (+)
G529504 NA non-coding downstream 866 60406722 ~ 60407035 (+)
G529506 NA non-coding downstream 1833 60407689 ~ 60408096 (+)
G529523 NA non-coding downstream 14946 60420802 ~ 60421066 (+)
G529525 NA non-coding downstream 19650 60425506 ~ 60425828 (+)
G528653 NA other upstream 633553 59771708 ~ 59772084 (+)
G527450 NA other upstream 1626620 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2033669 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2132801 58272079 ~ 58272836 (+)
G526547 NA other upstream 2292818 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 1565880 61971487 ~ 61979527 (+)
G531406 NA other downstream 1743917 62149773 ~ 62152218 (+)
G532259 NA other downstream 2414564 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2606402 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2627075 63032931 ~ 63198734 (+)

Expression


Co-expression Network