G529504


Basic Information

Item Value
gene id G529504
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60406722 ~ 60407035 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599797
ACTCACTAGTCAGTGCAGCAAAATTTAGCAAAGAGGTTGGAATAAATCAAGTAAAAGTGTGATTGTGCATGTACGGAAAACAGAACAGGAAGAAGGGTCAGTTAGTCTCAGTACAAGGTGCCGAAGCTGCCCATGCCGTTTCTCCTGAACTGGTTGTCCTGTATGGAGACAAACATCTCCTGGGAGAGCAGGTTGTCATCTGCCTGGGTCACTCCCAGCTCCTTCAGCATGCTCTTCTGGCGACGCTGCTTCTTGGCTGATGTGGCCACCAGCTCCCTCTTGATGGCATCGTTGCACTCCGTGAACTCCGGAGG

Function

NR:

description
LOW QUALITY PROTEIN: SHC SH2 domain-binding protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599797 True 314 lncRNA 0.51 1 60406722 60407035

Neighbor

gene id symbol gene type direction distance location
LOC110526261 LOC106562006 coding upstream 231173 60167505 ~ 60175549 (+)
LOC110526256 LOC106562011 coding upstream 545076 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 559136 59843628 ~ 59847586 (+)
tshz3b tshz3 coding upstream 1030041 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 1406184 58814483 ~ 59000538 (+)
LOC100653452 LOC106587300 coding downstream 23166 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 41571 60448606 ~ 60452270 (+)
LOC110526268 LOC106587295 coding downstream 100924 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 264673 60671708 ~ 60752783 (+)
LOC110526274 LOC106561991 coding downstream 408548 60815583 ~ 60863460 (+)
G529502 NA non-coding upstream 292 60406222 ~ 60406430 (+)
G529500 NA non-coding upstream 866 60405637 ~ 60405856 (+)
G529052 NA non-coding upstream 326350 60080169 ~ 60080372 (+)
G528986 NA non-coding upstream 372425 60034072 ~ 60034297 (+)
G528802 NA non-coding upstream 506109 59896793 ~ 59900613 (+)
G529506 NA non-coding downstream 654 60407689 ~ 60408096 (+)
G529523 NA non-coding downstream 13767 60420802 ~ 60421066 (+)
G529525 NA non-coding downstream 18471 60425506 ~ 60425828 (+)
G529528 LOC104954799 non-coding downstream 25794 60432829 ~ 60435307 (+)
G529559 NA non-coding downstream 71656 60478691 ~ 60479017 (+)
G528653 NA other upstream 634638 59771708 ~ 59772084 (+)
G527450 NA other upstream 1627705 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2034754 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2133886 58272079 ~ 58272836 (+)
G526547 NA other upstream 2293903 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 1564701 61971487 ~ 61979527 (+)
G531406 NA other downstream 1742738 62149773 ~ 62152218 (+)
G532259 NA other downstream 2413385 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2605223 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2625896 63032931 ~ 63198734 (+)

Expression


Co-expression Network