G529523


Basic Information

Item Value
gene id G529523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60420802 ~ 60421066 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599817
AGAAAATACAGTTATAGCATTGAGGGCATGTGCGACCTGGTCTTTGTTTCTTAAGAAAAGAGTAGTATCATCAGCCAGTTGGGAGATTTTGATTTCTTTGTTAAAAATGGTTACGCCATACGAATTTGCATTATTCAGAATATCTAGAGATAGAAGTTCCACAaccaaaatgaataaaaatgGCGAAATTGGGCATCCCTGTTGTACACTTCTGTTGATACTACATCTTTTGGAAGTATTAAGGTTTAGTAGCACATAACTATTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599817 True 265 lncRNA 0.35 1 60420802 60421066

Neighbor

gene id symbol gene type direction distance location
LOC110526261 LOC106562006 coding upstream 245253 60167505 ~ 60175549 (+)
LOC110526256 LOC106562011 coding upstream 559156 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 573216 59843628 ~ 59847586 (+)
tshz3b tshz3 coding upstream 1044121 59343119 ~ 59376681 (+)
LOC110526935 LOC106562040 coding upstream 1420264 58814483 ~ 59000538 (+)
LOC100653452 LOC106587300 coding downstream 9135 60430201 ~ 60432307 (+)
LOC110526265 NA coding downstream 27540 60448606 ~ 60452270 (+)
LOC110526268 LOC106587295 coding downstream 86893 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 250642 60671708 ~ 60752783 (+)
LOC110526274 LOC106561991 coding downstream 394517 60815583 ~ 60863460 (+)
G529506 NA non-coding upstream 12706 60407689 ~ 60408096 (+)
G529504 NA non-coding upstream 13767 60406722 ~ 60407035 (+)
G529502 NA non-coding upstream 14372 60406222 ~ 60406430 (+)
G529500 NA non-coding upstream 14946 60405637 ~ 60405856 (+)
G529052 NA non-coding upstream 340430 60080169 ~ 60080372 (+)
G529525 NA non-coding downstream 4440 60425506 ~ 60425828 (+)
G529528 LOC104954799 non-coding downstream 11763 60432829 ~ 60435307 (+)
G529559 NA non-coding downstream 57625 60478691 ~ 60479017 (+)
G529561 NA non-coding downstream 60910 60481976 ~ 60482185 (+)
G529562 NA non-coding downstream 63196 60484262 ~ 60484462 (+)
G528653 NA other upstream 648718 59771708 ~ 59772084 (+)
G527450 NA other upstream 1641785 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2048834 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2147966 58272079 ~ 58272836 (+)
G526547 NA other upstream 2307983 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 1550670 61971487 ~ 61979527 (+)
G531406 NA other downstream 1728707 62149773 ~ 62152218 (+)
G532259 NA other downstream 2399354 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2591192 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2611865 63032931 ~ 63198734 (+)

Expression


Co-expression Network