G529559


Basic Information

Item Value
gene id G529559
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60478691 ~ 60479017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599859
tgctttccacctggctactcctaccccggtcaacagcactgcaccccccacagcaactcgcccaagccttccccatttctccttctcccaaatccagtcagctgatgttctgaaagagctgcaaaatctggacccctacaaatcagctgggctagacaatctggaccctttctttctaaaattatctgccgaaattgttgccacccctattactagcctgttcaacctctctttcgtgtcgtctgagattcccaaagattggaaagcagctgcggtcaaccccctcttcaaaggggggggggcactcttgacccaaactgctacaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599859 True 327 lncRNA 0.52 1 60478691 60479017

Neighbor

gene id symbol gene type direction distance location
LOC110526265 NA coding upstream 26421 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 46384 60430201 ~ 60432307 (+)
LOC110526261 LOC106562006 coding upstream 303142 60167505 ~ 60175549 (+)
LOC110526256 LOC106562011 coding upstream 617045 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 631105 59843628 ~ 59847586 (+)
LOC110526268 LOC106587295 coding downstream 28942 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 192691 60671708 ~ 60752783 (+)
LOC110526274 LOC106561991 coding downstream 336566 60815583 ~ 60863460 (+)
LOC110526277 LOC106587287 coding downstream 1406816 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 1436702 61903571 ~ 61960273 (+)
G529528 LOC104954799 non-coding upstream 43384 60432829 ~ 60435307 (+)
G529525 NA non-coding upstream 52863 60425506 ~ 60425828 (+)
G529523 NA non-coding upstream 57625 60420802 ~ 60421066 (+)
G529506 NA non-coding upstream 70595 60407689 ~ 60408096 (+)
G529504 NA non-coding upstream 71656 60406722 ~ 60407035 (+)
G529561 NA non-coding downstream 2959 60481976 ~ 60482185 (+)
G529562 NA non-coding downstream 5245 60484262 ~ 60484462 (+)
G529570 NA non-coding downstream 13240 60492257 ~ 60492474 (+)
G529571 NA non-coding downstream 13756 60492773 ~ 60492977 (+)
G529573 NA non-coding downstream 14925 60493942 ~ 60494141 (+)
G528653 NA other upstream 706607 59771708 ~ 59772084 (+)
G527450 NA other upstream 1699674 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2106723 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2205855 58272079 ~ 58272836 (+)
G526547 NA other upstream 2365872 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 1492719 61971487 ~ 61979527 (+)
G531406 NA other downstream 1670756 62149773 ~ 62152218 (+)
G532259 NA other downstream 2341403 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2533241 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2553914 63032931 ~ 63198734 (+)

Expression


Co-expression Network