G529575



Basic Information


Item Value
gene id G529575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60497604 ~ 60497993 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU599876
ATTTATCTCTTTTAATGACAAAAATAAGTCACATTAAAGAGGATTTGCCTTtgacatttaaattacaggtgtCCAAAGCAAATATGACATATTTAATATAATGTCACCAATAAtgaaacaaaagacaaaacaatatGCATTTAAATTAAGATGGTACACAAGCATTATAAATATAAATGTGCAAGGCCTTCTCCCAAAGTCTTAAGCATGATACAAAATATATTGAACATTATGTTCCAATGGCATCTAGACTTAAATAAACAATGTTTACTAGCACTACAAGCCAATAACATTATAGAAGCCAGTTACAATGCTAGGATGGCCCTCCATGCTTCAACATATTTATGCCCTTTTTTAATAGAAATGTTTTGCATTTGCTACCGACAGCTT

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU599876 True 390 lncRNA 0.31 1 60497604 60497993
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110526265 NA coding upstream 45334 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 65297 60430201 ~ 60432307 (+)
LOC110526261 LOC106562006 coding upstream 322055 60167505 ~ 60175549 (+)
LOC110526256 LOC106562011 coding upstream 635958 59851162 ~ 59861646 (+)
LOC118965037 NA coding upstream 650018 59843628 ~ 59847586 (+)
LOC110526268 LOC106587295 coding downstream 9966 60507959 ~ 60525243 (+)
LOC110526270 LOC106587291 coding downstream 173715 60671708 ~ 60752783 (+)
LOC110526274 LOC106561991 coding downstream 317590 60815583 ~ 60863460 (+)
LOC110526277 LOC106587287 coding downstream 1387840 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 1417726 61903571 ~ 61960273 (+)
G529573 NA non-coding upstream 3463 60493942 ~ 60494141 (+)
G529571 NA non-coding upstream 4627 60492773 ~ 60492977 (+)
G529570 NA non-coding upstream 5130 60492257 ~ 60492474 (+)
G529562 NA non-coding upstream 13142 60484262 ~ 60484462 (+)
G529561 NA non-coding upstream 15419 60481976 ~ 60482185 (+)
G529574 cssa11h16orf87 non-coding downstream 154 60498147 ~ 60499184 (+)
G529576 NA non-coding downstream 3896 60501889 ~ 60504820 (+)
G529592 NA non-coding downstream 36900 60534893 ~ 60535096 (+)
G529537 NA non-coding downstream 42746 60540739 ~ 60540954 (+)
G529539 neto2 non-coding downstream 45736 60543729 ~ 60560821 (+)
G528653 NA other upstream 725520 59771708 ~ 59772084 (+)
G527450 NA other upstream 1718587 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2125636 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2224768 58272079 ~ 58272836 (+)
G526547 NA other upstream 2384785 58110906 ~ 58112819 (+)
LOC110526282 LOC106561985 other downstream 1473743 61971487 ~ 61979527 (+)
G531406 NA other downstream 1651780 62149773 ~ 62152218 (+)
G532259 NA other downstream 2322427 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2514265 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2534938 63032931 ~ 63198734 (+)

Expression


G529575 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
End of interactive chart.

G529575 Expression in each Bioproject

Bar chart with 11 bars.
G529575 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
End of interactive chart.

Co-expression Network