G529675


Basic Information

Item Value
gene id G529675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60717036 ~ 60718709 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU599984
gtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagcgaagctataacagtacagtagcgaggctatatactgtacagtagtgaggctataacagtacagtagcgaagctataacagtacagtagcgaggctatatactgtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagcgaggctatatactgtacagtagcaaagctataacagtacagtagtgaggctataacagtaaagTAGTGAAGCTATAAcagtacagtagcgaggctatatactgtacagtagcgaggctatatactgtacagtagcgaggctataacagtacagtagcgaggctataacagtacagtagcgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagcgaggctatatactgtacagtagcgaagctataacagtacagtagtgaggctataacagtaaagTAGTGAAGCTATAAcagtacagtagcgaggctatatactgtacagtagcgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagcgaggctttaacagtacagtagtgaggctataacagtacagtagcgaggctttaacagtacagtagcgaggctatatactgtacagtagcgaggctatataatgtacagtagcgaggctataacagtacagtagtgaagctatgacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaagctataacagtacagtagcgaggctatatactgtacagtagcgaggctataacagtacagtagtgaagctataacagtacagtagtgaggctataacagtacagtagtgaggctataacagtacagtagtgaggctttaacagtacagtagcgaggctatatactgtacagttgcgaggctataacagtacagTAGCGAGGCCAAATActgtacagtagcgaggctatataatgtacaatagcgaggctataacagtagcgaggctataacagtagcgaggctatataatgtacagtagcgaggctataacagtagcgaggctatttacattcaccggttagtcgggctaattgaggtagtatgtacgtgtaggtatggttaaagtgactatgcatatatgataagcagagagtagcagtagcgtaaaagaggagaATGTGAAATGAATGCTCCTTGACTGTGGTTTGTTCCACATGAGAAGCGACGCGTTTGCTCGGCTCAGAGGTTGAGTCAGATCAAAGACACCCCAGGGAGTTTCAGGAAACACTCTCCAAATAAACACAGAACAAAAGCCAGAGAGGAGATATCATTAAGCCATATGCCTTAAAATATACacccacccacaaacacacacacaccatcaaagCCCAGCAAACACGTAATACACAATGCACGTAATACACAAGTATACACCAGATTAGCTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597945, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU599984 True 1652 lncRNA 0.42 2 60717036 60718709

Neighbor

gene id symbol gene type direction distance location
LOC110526268 LOC106587295 coding upstream 191793 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 264766 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 284729 60430201 ~ 60432307 (+)
LOC110526261 LOC106562006 coding upstream 541487 60167505 ~ 60175549 (+)
LOC110526256 LOC106562011 coding upstream 855390 59851162 ~ 59861646 (+)
LOC110526274 LOC106561991 coding downstream 96874 60815583 ~ 60863460 (+)
LOC110526277 LOC106587287 coding downstream 1167124 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 1197010 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 1242677 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 1252778 61971487 ~ 61979527 (+)
G529539 neto2 non-coding upstream 156215 60543729 ~ 60560821 (+)
G529537 NA non-coding upstream 176082 60540739 ~ 60540954 (+)
G529592 NA non-coding upstream 181940 60534893 ~ 60535096 (+)
G529576 NA non-coding upstream 212216 60501889 ~ 60504820 (+)
G529574 cssa11h16orf87 non-coding upstream 217852 60498147 ~ 60499184 (+)
G529542 NA non-coding downstream 34563 60753272 ~ 60753484 (+)
G529875 NA non-coding downstream 42369 60761078 ~ 60761319 (+)
G529890 NA non-coding downstream 55008 60773717 ~ 60773958 (+)
G529898 NA non-coding downstream 58671 60777380 ~ 60777622 (+)
G529940 NA non-coding downstream 135071 60853780 ~ 60854103 (+)
G528653 NA other upstream 944952 59771708 ~ 59772084 (+)
G527450 NA other upstream 1938019 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2345068 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2444200 58272079 ~ 58272836 (+)
G526547 NA other upstream 2604217 58110906 ~ 58112819 (+)
G531406 NA other downstream 1431064 62149773 ~ 62152218 (+)
G532259 NA other downstream 2101711 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2293549 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2314222 63032931 ~ 63198734 (+)

Expression


Co-expression Network