G529890


Basic Information

Item Value
gene id G529890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60773717 ~ 60773958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU600208
acctactaccataccctgttcaaaggcatttcaatcttttgtcttgcccatttaccctttGAATagcacaaatacacaatccaatttaacctgtctccacccattcatctacactgattgaaaggGATTTAccaggtgacatcaataatggatcatagctttcacctagattcacctggtcagtctatgtcatggaaagagcaggtgttcctaatgttttgtaaactcagtgtatacCGGTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU600208 True 242 lncRNA 0.40 1 60773717 60773958

Neighbor

gene id symbol gene type direction distance location
LOC110526270 LOC106587291 coding upstream 20934 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 248474 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 321447 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 341410 60430201 ~ 60432307 (+)
LOC110526261 LOC106562006 coding upstream 598168 60167505 ~ 60175549 (+)
LOC110526274 LOC106561991 coding downstream 41625 60815583 ~ 60863460 (+)
LOC110526277 LOC106587287 coding downstream 1111875 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 1141761 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 1187428 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 1197529 61971487 ~ 61979527 (+)
G529875 NA non-coding upstream 12398 60761078 ~ 60761319 (+)
G529542 NA non-coding upstream 20233 60753272 ~ 60753484 (+)
G529675 NA non-coding upstream 55008 60717036 ~ 60718709 (+)
G529539 neto2 non-coding upstream 212896 60543729 ~ 60560821 (+)
G529537 NA non-coding upstream 232763 60540739 ~ 60540954 (+)
G529898 NA non-coding downstream 3422 60777380 ~ 60777622 (+)
G529940 NA non-coding downstream 79822 60853780 ~ 60854103 (+)
G530174 NA non-coding downstream 190777 60964735 ~ 60965227 (+)
G530181 NA non-coding downstream 195217 60969175 ~ 60969376 (+)
G530188 NA non-coding downstream 198523 60972481 ~ 60977654 (+)
G528653 NA other upstream 1001633 59771708 ~ 59772084 (+)
G527450 NA other upstream 1994700 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2401749 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2500881 58272079 ~ 58272836 (+)
G526547 NA other upstream 2660898 58110906 ~ 58112819 (+)
G531406 NA other downstream 1375815 62149773 ~ 62152218 (+)
G532259 NA other downstream 2046462 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2238300 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2258973 63032931 ~ 63198734 (+)

Expression


Co-expression Network