G529940


Basic Information

Item Value
gene id G529940
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60853780 ~ 60854103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU600258
ataataataaaagtaataatagttACACAATTAGTaacaacttggctatatacagttgaagtcggaagtttacatacaccttagccaaatacatttaaattcagtttttcacaattcctaatcctagtaacaattcactgtcttaggtcagttaggatcactactttattttaagaatatgaaatgtcagaataatagtaaagagaattatttatttcagcttttatttatttcatcacattcccagtaggtcagaagtctacatacactcaattagtatttggtagcattgcctttacattgtttaaattgggtcaaatgggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU600258 True 324 lncRNA 0.29 1 60853780 60854103

Neighbor

gene id symbol gene type direction distance location
LOC110526270 LOC106587291 coding upstream 100997 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 328537 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 401510 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 421473 60430201 ~ 60432307 (+)
LOC110526261 LOC106562006 coding upstream 678231 60167505 ~ 60175549 (+)
LOC110526277 LOC106587287 coding downstream 1031730 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 1061616 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 1107283 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 1117384 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 1171985 62026088 ~ 62032556 (+)
G529898 NA non-coding upstream 76158 60777380 ~ 60777622 (+)
G529890 NA non-coding upstream 79822 60773717 ~ 60773958 (+)
G529875 NA non-coding upstream 92461 60761078 ~ 60761319 (+)
G529542 NA non-coding upstream 100296 60753272 ~ 60753484 (+)
G529675 NA non-coding upstream 135071 60717036 ~ 60718709 (+)
G530174 NA non-coding downstream 110632 60964735 ~ 60965227 (+)
G530181 NA non-coding downstream 115072 60969175 ~ 60969376 (+)
G530188 NA non-coding downstream 118378 60972481 ~ 60977654 (+)
G530194 NA non-coding downstream 125754 60979857 ~ 60980105 (+)
G530463 NA non-coding downstream 458046 61312149 ~ 61312435 (+)
G528653 NA other upstream 1081696 59771708 ~ 59772084 (+)
G527450 NA other upstream 2074763 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2481812 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2580944 58272079 ~ 58272836 (+)
G526547 NA other upstream 2740961 58110906 ~ 58112819 (+)
G531406 NA other downstream 1295670 62149773 ~ 62152218 (+)
G532259 NA other downstream 1966317 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2158155 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2178828 63032931 ~ 63198734 (+)

Expression


Co-expression Network