G530188


Basic Information

Item Value
gene id G530188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 60972481 ~ 60977654 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU600513
tgtgataacatgcgtcttggtgagaggtgtaggagtcaggcgcaggagagcagggatgtctgaggagcgtgtttaataatagtccagcaatgcaaatggcacagaacaaaaatcccaaaactacgctctcgaataatcgtgcaaacacacggTCCGACACTTTACATACACGTGCGTAAAtgcgaaaaaaacaacaaacatcaaataccatcgaacgcaatacacacaagtctaatcctgcacgaattacggcaggtaacagctgccctatatacccacagaaatcaaagcaattgaaaaccaggtgtgaaaaggaacacagacaaaacaaccagaaaaagaaaaagggatcggtagtggctagtagaccggcgacgccgagcgccgagcgccgcccgaacagggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU600513 True 407 lncRNA 0.47 2 60972481 60977654

Neighbor

gene id symbol gene type direction distance location
LOC110526274 LOC106561991 coding upstream 109021 60815583 ~ 60863460 (+)
LOC110526270 LOC106587291 coding upstream 219698 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 447238 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 520211 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 540174 60430201 ~ 60432307 (+)
LOC110526277 LOC106587287 coding downstream 908179 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 938065 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 983732 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 993833 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 1048434 62026088 ~ 62032556 (+)
G530181 NA non-coding upstream 3105 60969175 ~ 60969376 (+)
G530174 NA non-coding upstream 7254 60964735 ~ 60965227 (+)
G529940 NA non-coding upstream 118378 60853780 ~ 60854103 (+)
G529898 NA non-coding upstream 194859 60777380 ~ 60777622 (+)
G529890 NA non-coding upstream 198523 60773717 ~ 60773958 (+)
G530194 NA non-coding downstream 2203 60979857 ~ 60980105 (+)
G530463 NA non-coding downstream 334495 61312149 ~ 61312435 (+)
G530464 NA non-coding downstream 335233 61312887 ~ 61313283 (+)
G530470 NA non-coding downstream 342991 61320645 ~ 61320969 (+)
G530479 NA non-coding downstream 351310 61328964 ~ 61329180 (+)
G528653 NA other upstream 1200397 59771708 ~ 59772084 (+)
G527450 NA other upstream 2193464 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2600513 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 2699645 58272079 ~ 58272836 (+)
G526547 NA other upstream 2859662 58110906 ~ 58112819 (+)
G531406 NA other downstream 1172119 62149773 ~ 62152218 (+)
G532259 NA other downstream 1842766 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 2034604 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 2055277 63032931 ~ 63198734 (+)

Expression


Co-expression Network