G530463


Basic Information

Item Value
gene id G530463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 61312149 ~ 61312435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU600803
atagaggatttatcagtggtgacagtgtttcctagcctcagagcagtgggcagctgggaggaggtgctcttattctccatggactttacagtgtcccagaactttttttgagttagtactacaggatgcacatttctgtttgaaaaagcttgccttagcttttctaactgcctgtgtatatttgttcctgacttccctgaaaagttgcatatcacaggggctattcgatgctaatgcagaacgccacaggatgtttttgtgctggtcaagggcagacaggtctggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU600803 True 287 lncRNA 0.45 1 61312149 61312435

Neighbor

gene id symbol gene type direction distance location
LOC110526274 LOC106561991 coding upstream 448689 60815583 ~ 60863460 (+)
LOC110526270 LOC106587291 coding upstream 559366 60671708 ~ 60752783 (+)
LOC110526268 LOC106587295 coding upstream 786906 60507959 ~ 60525243 (+)
LOC110526265 NA coding upstream 859879 60448606 ~ 60452270 (+)
LOC100653452 LOC106587300 coding upstream 879842 60430201 ~ 60432307 (+)
LOC110526277 LOC106587287 coding downstream 573398 61885833 ~ 61902001 (+)
LOC110526278 LOC106587286 coding downstream 603284 61903571 ~ 61960273 (+)
LOC110526279 LOC106587285 coding downstream 648951 61961386 ~ 61964415 (+)
LOC110526282 LOC106561985 coding downstream 659052 61971487 ~ 61979527 (+)
LOC110526284 LOC106587278 coding downstream 713653 62026088 ~ 62032556 (+)
G530194 NA non-coding upstream 332044 60979857 ~ 60980105 (+)
G530188 NA non-coding upstream 334495 60972481 ~ 60977654 (+)
G530181 NA non-coding upstream 342773 60969175 ~ 60969376 (+)
G530174 NA non-coding upstream 346922 60964735 ~ 60965227 (+)
G529940 NA non-coding upstream 458046 60853780 ~ 60854103 (+)
G530464 NA non-coding downstream 452 61312887 ~ 61313283 (+)
G530470 NA non-coding downstream 8210 61320645 ~ 61320969 (+)
G530479 NA non-coding downstream 16529 61328964 ~ 61329180 (+)
G530732 NA non-coding downstream 31352 61343787 ~ 61344008 (+)
G530739 NA non-coding downstream 44626 61357061 ~ 61357303 (+)
G528653 NA other upstream 1540065 59771708 ~ 59772084 (+)
G527450 NA other upstream 2533132 58778723 ~ 58779017 (+)
LOC110526933 LOC106562045 other upstream 2940181 58318920 ~ 58408967 (+)
G526628 LOC106587143 other upstream 3039313 58272079 ~ 58272836 (+)
G526547 NA other upstream 3199330 58110906 ~ 58112819 (+)
G531406 NA other downstream 837338 62149773 ~ 62152218 (+)
G532259 NA other downstream 1507985 62820420 ~ 62822616 (+)
LOC110526311 LOC106587159 other downstream 1699823 63005672 ~ 63068991 (+)
G532237 LOC106591742 other downstream 1720496 63032931 ~ 63198734 (+)

Expression


Co-expression Network